Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00270 ATGGTGAAATGTATAGATAATGAGATTTGCGATCTTGATAGTAGTAAAAGTGAATTATGGGCAGAATGTCACAGCAAACTCAATGTTGCTCTTTCGGTGATGCATGAATGTTTTGAGCCCCTAAAGGAATCTGCATCTTGTAGAAATCTGGTAGACGATGTTCTATTCAGCAGATGGCTGAAATTTGTAATAATCTATAGAACCTTGGAATTCACGTTCTTGCTCTTGATTTATAGGGATCCACGGTGCTTGTGTGTCTCATGGAAGAACTGA 273 0.3846 MVKCIDNEICDLDSSKSELWAECHSKLNVALSVMHECFEPLKESASCRNLVDDVLFSRWLKFVIIYRTLEFTFLLLIYRDPRCLCVSWKN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00270 90 PANTHER PHD FINGER PROTEIN 12 3 62 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00270 Trre-Chr1 1968045 1970474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00270 1 75 PHD Transcription Factor Family AT5G58610 44.000 1.97e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00270 - - psat:127084557 92.0485