Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00265 ATGAATCCACATCATCATAATCATCATCTTCATCGTCATCAAGTACAAGGTGTATCAAGAAACTTCAACCATCAACACTTCCAACCTCACATCTATGGTCGCGATTTCAAGCGAAATACAAGAGTTGTTAATGGTGTCAAAAGAAGTGTTAGAGCTCCAAGAATGAGATGGACCACAACTCTTCATTCTCATTTTGTTCATGCTGTTCAACTTCTCGGTGGTCACGAAAGGGCAACACCAAAATCTGTGTTAGAACTAATGAATGTGAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTACAGATGTATAGAACAGTGAAGACCACTGACAAATCAGGAGCAGGTCATGGGATGCTACAGACACAAGGAATTAATAATAATGTTCCTTTGCATGGAACTAATTCTTGTGAGAGACCAAATTTACCACAAGACAGGTAA 441 0.3968 MNPHHHNHHLHRHQVQGVSRNFNHQHFQPHIYGRDFKRNTRVVNGVKRSVRAPRMRWTTTLHSHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKTTDKSGAGHGMLQTQGINNNVPLHGTNSCERPNLPQDR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00265 146 MobiDBLite consensus disorder prediction 112 146 - -
Trre1g00265 146 FunFam Myb family transcription factor 51 109 - -
Trre1g00265 146 NCBIfam myb-like DNA-binding domain, SHAQKYF class 53 106 IPR006447 GO:0003677
Trre1g00265 146 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 5 121 IPR044847 GO:0000976|GO:0006355|GO:0010158
Trre1g00265 146 SUPERFAMILY Homeodomain-like 50 107 IPR009057 -
Trre1g00265 146 Gene3D - 52 109 - -
Trre1g00265 146 Pfam Myb-like DNA-binding domain 54 105 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00265 Trre-Chr1 1920659 1921976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00265 18 124 G2-like Transcription Factor Family AT5G42630 70.796 4.98e-54 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre1g00265 Myb_DNA-binding 4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00265 - - gmx:100778242 207.608