Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00213 ATGGCTCATCTTCTACTCTTGTTGATTTTTATCCCGCTGCTAGTGTTCATAGCAAGGATCACATACTCAATCATTTGGCTTCCATGGATCATTACTCGTCACTTTCACAAACAAAACATAAGGGGTCCTCCCTACTGTCTGATTAAAGGAAATGCCGATGAGATCCAGCGTATGTTCGCGGAAGTTCAATCCAAGCCAATGGATTTATGCCACGATATTGTTCAGCGTGTGTGTCCATCTTATCATAGATGGGCTCATGTGTACGGGAAAACTGTCCTTAGTTGGTACGGGTCGAGGCCTAGACTGATATTATCCGACCCAGTTATTATTAAGGAGGCACTTTTGAAAACCGGTGAATGGTTTGAGAGGACGGATCTGAATCCGTTGTCAAAACAGTTTTATGGAGAAGGAATTTTATTCTCAAAGGGAAAGAAGTGGACCACTTATAGATCAATTGCTAATCATGCTTTTAAAATGGAGAGGATTAAGTCTTGGATCCCCCAAATTATAGACACAACAAAATTAATGTTTTACAAGTGGGAAGATGAGAACAATGGCAATGAAGAATTTGAGATTGATGTGAATAAAGATCTCCAAAATCTTTCAGCTGACATTATATCTAGAGTTGCTTTTGGAAGTAACTATGAAGAAGGGAAAGAGATTTTTGATTTACAAGATCAACATTGTCATCTTGCCTGTCTTGCTCAAAGAAGTGCTTATTTTCCTGGCTTAAGGTATGTACCTACCAAGAATAACAGAGAAAGAACGAGATTAGAAAAGAAAACTCGTGAACTAATTCAAGTATTGATTGAAGATAACCATAAAGCACAAAATAATTCAGAAAATTTGCTCAATTTGTTAATGTCTCCTCACAAATTTATCAACAATGAGACACAAAGGTTAGGAATGGATGAGATTATAGATAATTGTAAAAATTTCTATTTGGCAGGAAAGGAAACAAGTGCCAATTCAATAAGTTGGGCAATCCTACTTTTAGGGATGAATCAAGAATGGCAAAATAAGGCACGTGAGGAGGTAATTGCTGTTTTAGGACATCATACACCCCCAACTGCTGAAACAATAAGTGGGCTCAAATTAGTGAGCTTGGTAATTCAGGAAACACTTAGACTCTATCCTATAGCAGGGATATTGGTGAGGCAAGCAACTAAAAGAGTTAACATTGGGAACATTGATATTCTTGGTGGCACACAATTATACATGTCTATAATTTCAGTTCATCATGATACTAAAATATGGGGAGAAGATGCTCTTGAATTCAATCCTATGAGGTTTACAAAGCTCACAAAGCATTCATCTTCTTCATATTTCCCATTTGGATTTGGCCCCAACTATTGTGTAGGTCAAAATTTAGCCATGATTGAAATGAAGATTGTTCTTGCCATGATTTTGCAGAGATATTCTTTTTATGTTTCACCAACATATGTTCATGGACCAATGCTGGTGATGAGTGTGTCACCTCAATATGGCATGCAAATTGTGTTTAAAAGACTATGA 1515 0.371 MAHLLLLLIFIPLLVFIARITYSIIWLPWIITRHFHKQNIRGPPYCLIKGNADEIQRMFAEVQSKPMDLCHDIVQRVCPSYHRWAHVYGKTVLSWYGSRPRLILSDPVIIKEALLKTGEWFERTDLNPLSKQFYGEGILFSKGKKWTTYRSIANHAFKMERIKSWIPQIIDTTKLMFYKWEDENNGNEEFEIDVNKDLQNLSADIISRVAFGSNYEEGKEIFDLQDQHCHLACLAQRSAYFPGLRYVPTKNNRERTRLEKKTRELIQVLIEDNHKAQNNSENLLNLLMSPHKFINNETQRLGMDEIIDNCKNFYLAGKETSANSISWAILLLGMNQEWQNKAREEVIAVLGHHTPPTAETISGLKLVSLVIQETLRLYPIAGILVRQATKRVNIGNIDILGGTQLYMSIISVHHDTKIWGEDALEFNPMRFTKLTKHSSSSYFPFGFGPNYCVGQNLAMIEMKIVLAMILQRYSFYVSPTYVHGPMLVMSVSPQYGMQIVFKRL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00213 504 Coils Coil 266 286 - -
Trre1g00213 504 Gene3D Cytochrome P450 29 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 SUPERFAMILY Cytochrome P450 74 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 Pfam Cytochrome P450 82 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00213 504 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00213 Trre-Chr1 1569022 1572326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00213 22 504 Cytochrome P450 AT1G75130 48.765 4.66e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00213 - - tpra:123886278 930.628