Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00191 ATGAAGAGTGGAATAACAGTGAGTGTTGTTATGATGTTGTTTTTGTTAGTTGAGTTAACAATGAGTTTGAGTTCAAGAAACGAATGGTCGGCGTTATTGGAGCTTCGTTCGTCGTTGGGGATAAGGGGAAAAGATTGGCATAAAAAAGTCGAACCGTGTGGGAACTGGACTGGTGTTAAATGCAGGAATGATCGAGTTGTTGGTATCAACGTGTCCGGGTTGAAGAGAACCCGGTTGGGCCGTCTTAACCCGAGTTTTGAAGTGGATTCTCTTCAAAATTTCACTCTATTGGAGTCTTTCAATGCTTCTGGGTTCATGCTTAATGGGTCTATTCCTGACTGGTTTGGTGAGAAACTTAGTACACTACAAGAGCTTGATTTGAGGTCTTGTTCAATATCTGGTGTGATTCCTGGATCACTTGGGGGTATGAGAAGTTTGAAGCTTTTATTTCTTTCAGGGAATAATCTTACTAGTAGAGTGCCTTCAAGTTTGGGGTTGTTATCTAATCTTTCTATTCTTGATCTCTCTGGAAATATGTTTTCAGGATCAGTACCTGACAATTTCTCTAATCTTGGTAACCTTACAAGGCTTGATCTTTCTAATAATTACTTATCTGGGTCTATTCCACCTGAACTGGGTAGCCTTTCAAATCTTCAAAATTTGAACCTTTCTGATAATGCTTTCACTGGTTCTGTTCCCTCTCAGCTACGTAATCTTTCAAAGTTGGCTGAGCTTGATCTTAGGATGAATTCTTTTTCTGGGTCGTTACCTGTTAGTTTGTGGTCAATGCCTAGTTTGCGCTTTTTTGATGTATCAGGCAACAGTCTCACTGGTCCACTGCCAAAATTGTCTGGTTTAAATGTTAGCTCAAATGATGGCATATTCAATCTATCAAACAATTTGTTTTATGGATCTGTAAATGGTTCTACGAGCAAGATTAAAATGATTGATTTATCTGGTAATTATTTGGATGGCGTTGTGCAAGGTGGCGGTGATGGTCTTACTCTAGCTAGGAATTGCCTACAGAAGATTCCAAACCAGAGGAGTTTGGAAGATTGTAGAATGTTTTATCTCCAGAGAAATTTACCCTTTGATCAGGGTGACCTTGAGTCCAAGAAAAACAATAAAAGAGTGATATTCATACTGGCAGGTATATTTGGTGGGTTTGGCTTTATTGTTCTACTGGTATTGGCCCTCATATTGGTTCTGAAACAATGTCATAAAAGTAAGGATTTGGAAACTGAAAGAGGGACCACAAATGGGGGGCCTGTTACAGAAGGGGAAAGTCCTACACCTAAGGATCCTGTTTTTGTAACTGCCGTGGGCGAATCATTTACTTTTGAACAAATACTCCATTTTACCGGCAATTTTGATGAAGCAAACTTAATAAAGCAAGGTCATTCTGGAGACTTTTTCTGGGGAGTTTTAGAAAACGGAGCAACTGTGGTTATCAAAAGGGTAGATTTAAGTTTATTCAAGAGAGAATCTTACATTGTAGAATTGGAATTATTAAGCAAGGTTTCACATGCAAGATTGGTCCCAATTTTGGGACAATGCATGGACAATGAGAAGATTAAATGTATAGTTTACAAGTATATGATAAATGGAGATTTGGCTAGTTCCTTACACAGAGCCAGTGGTTCAGATGGTAAATTGCAGTCCATGGATTGGATCACAAGATTGAAAATTGCAGCAGGAGCTGCTGAAGGACTAGCTTACCTACATGATTGCAGCCCTCCGCTTGTTCACAGAGATATTCGAGCTAGTAGTATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAACGAGGTTACAGCACAAGGAGATTTTCATCAGAATGTCGTGTCAAGAGTTTTCAGCAAGCCACAATCTTCTACTCAAGGCAATCATGGTAAATCATCTGTGACATGTGCCTATGATGTCTACTGTTTTGGAAAGATTTTAATTGAGCTTGTTACCGGTAATATTGACATCAGTAAATCAGATGATGCCACCACAAAGGATTGGTTAGATCAAACCTTGAATTACATCACCATATATGATAAAGAACGGTTGGCTAAGATTGTTGACCCAACTTTAATAGTGGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATCGTGGCTAAGTCGTGTCTGAATCCTAAACCTTCAAAACGTCCTCCAATGAAACATGTCCTCAAAGCACTTGAAAATCCATTGAAGATTGTCAGAGAAGAAAGTTTTAGCTCAGCAAAATTGAGAACAACTTCATCTAATAGATCTTGGAGCACTGCATTCTTTGGTAGCTGGAGACACAGCTCATCAGACAGTGGTGCTACAATTAGGGAGGGTACTAGTAGTGGCAATAAACAAACAGGAAGATCAGGTTCTCATGGTAGTGGTGGTAATGATCACTCATCATCCAATAAAAGGTCATCCAATGAAGTTTTCCCCGAACCATTGGGAATGCAAGACGTGGAGAATGGAGAGGCAAGATGA 2493 0.3959 MKSGITVSVVMMLFLLVELTMSLSSRNEWSALLELRSSLGIRGKDWHKKVEPCGNWTGVKCRNDRVVGINVSGLKRTRLGRLNPSFEVDSLQNFTLLESFNASGFMLNGSIPDWFGEKLSTLQELDLRSCSISGVIPGSLGGMRSLKLLFLSGNNLTSRVPSSLGLLSNLSILDLSGNMFSGSVPDNFSNLGNLTRLDLSNNYLSGSIPPELGSLSNLQNLNLSDNAFTGSVPSQLRNLSKLAELDLRMNSFSGSLPVSLWSMPSLRFFDVSGNSLTGPLPKLSGLNVSSNDGIFNLSNNLFYGSVNGSTSKIKMIDLSGNYLDGVVQGGGDGLTLARNCLQKIPNQRSLEDCRMFYLQRNLPFDQGDLESKKNNKRVIFILAGIFGGFGFIVLLVLALILVLKQCHKSKDLETERGTTNGGPVTEGESPTPKDPVFVTAVGESFTFEQILHFTGNFDEANLIKQGHSGDFFWGVLENGATVVIKRVDLSLFKRESYIVELELLSKVSHARLVPILGQCMDNEKIKCIVYKYMINGDLASSLHRASGSDGKLQSMDWITRLKIAAGAAEGLAYLHDCSPPLVHRDIRASSILLDDKFEVRLGSLNEVTAQGDFHQNVVSRVFSKPQSSTQGNHGKSSVTCAYDVYCFGKILIELVTGNIDISKSDDATTKDWLDQTLNYITIYDKERLAKIVDPTLIVDEDLLEEVWAMAIVAKSCLNPKPSKRPPMKHVLKALENPLKIVREESFSSAKLRTTSSNRSWSTAFFGSWRHSSSDSGATIREGTSSGNKQTGRSGSHGSGGNDHSSSNKRSSNEVFPEPLGMQDVENGEAR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00191 830 ProSiteProfiles Protein kinase domain profile. 457 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre1g00191 830 Gene3D Phosphorylase Kinase; domain 1 428 532 - -
Trre1g00191 830 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 88 184 - -
Trre1g00191 830 Pfam Leucine rich repeat 121 179 IPR001611 GO:0005515
Trre1g00191 830 Pfam Leucine rich repeat 216 276 IPR001611 GO:0005515
Trre1g00191 830 FunFam Putative LRR receptor-like serine/threonine-protein kinase 533 754 - -
Trre1g00191 830 FunFam Leucine-rich receptor-like protein kinase family protein 185 282 - -
Trre1g00191 830 SUPERFAMILY L domain-like 48 324 - -
Trre1g00191 830 Gene3D Ribonuclease Inhibitor 237 379 IPR032675 -
Trre1g00191 830 Gene3D Transferase(Phosphotransferase) domain 1 533 756 - -
Trre1g00191 830 MobiDBLite consensus disorder prediction 769 813 - -
Trre1g00191 830 ProSiteProfiles cAMP/cGMP binding motif profile. 462 515 IPR000595 -
Trre1g00191 830 Gene3D Ribonuclease Inhibitor 185 236 IPR032675 -
Trre1g00191 830 SMART LRR_typ_2 215 238 IPR003591 -
Trre1g00191 830 SMART LRR_typ_2 143 166 IPR003591 -
Trre1g00191 830 SMART LRR_typ_2 191 214 IPR003591 -
Trre1g00191 830 SMART LRR_typ_2 119 142 IPR003591 -
Trre1g00191 830 SMART LRR_typ_2 239 263 IPR003591 -
Trre1g00191 830 SMART LRR_typ_2 280 304 IPR003591 -
Trre1g00191 830 SMART LRR_typ_2 167 190 IPR003591 -
Trre1g00191 830 ProSiteProfiles Leucine-rich repeat profile. 193 215 IPR001611 GO:0005515
Trre1g00191 830 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Trre1g00191 830 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 91 735 - -
Trre1g00191 830 MobiDBLite consensus disorder prediction 413 432 - -
Trre1g00191 830 Pfam Leucine Rich Repeat 193 215 IPR001611 GO:0005515
Trre1g00191 830 SUPERFAMILY Protein kinase-like (PK-like) 437 734 IPR011009 -
Trre1g00191 830 MobiDBLite consensus disorder prediction 769 830 - -
Trre1g00191 830 FunFam Predicted protein 429 532 - -
Trre1g00191 830 Pfam Protein kinase domain 462 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00191 Trre-Chr1 1408608 1411794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00191 32 626 Miscellaneous Gene Families AT2G16250 47.511 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Trre1g00191 Pkinase 3.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00191 - - gmx:100798381 1078.54