Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00182 ATGCTTCCCAATATTGCTGCTACAGCTCTGGAGATTCCAATTCCAAGCTGTTCTAAAGTCAAGATACATCATTCAATATGCATAGAGCTTCAAGGATTCATTGATAGAATATTGCATATTATTTTATCCATTGAATCTGCAAGACCAAATTGTGCCTTAGCAATTCAAGCACTGTGCTCTTTGAACTTCACATTGGATAAAGCCAAGTTAGTTATCAAACACTGTTCTGAGTCAAGTAAACTCTACCTGGTAATAACATCACACAAGATACTTTCAAGATGCGAAAAAATAAGAAACTCTTTTTCGTTGTACTTGACTCAGATTCAAAATACTGTTCCAATTCCATTGGTTGCTGAGATATGTACAATACTACAAGATCTAAGGGATACAAAATTTTCATTGGAATTTGAAGAAGATAAGACTAGGAAAATTTTACTTTCACTACTTGAGAAGGAATTTTCTGATTCAGTTTCTATGGAAAATGCAGAAGTTGAAGCTATTCAAATTGTAGCTTTGAGGTTGGATATAAAATCTTCATTTTCTCTCTTAGTAGAGAAAACAAGTCTTAAAATGCAACTTGAAAAGGTCTACAAGACAAACAACAAAGACAAGGAACTTTTACAATACCTTTATTATTTGTTGATTAAATATGGAAAATTCATTTTTCAGTTTCAAAATGGAAACAATGTGTGTGTGAATCAAGTCAATATTGTTGGAAATTTATGA 726 0.3196 MLPNIAATALEIPIPSCSKVKIHHSICIELQGFIDRILHIILSIESARPNCALAIQALCSLNFTLDKAKLVIKHCSESSKLYLVITSHKILSRCEKIRNSFSLYLTQIQNTVPIPLVAEICTILQDLRDTKFSLEFEEDKTRKILLSLLEKEFSDSVSMENAEVEAIQIVALRLDIKSSFSLLVEKTSLKMQLEKVYKTNNKDKELLQYLYYLLIKYGKFIFQFQNGNNVCVNQVNIVGNL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00182 241 Gene3D - 2 112 IPR036537 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00182 Trre-Chr1 1363103 1364524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00182 21 191 U-box Gene Family AT4G36550 39.766 3.62e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00182 - - psat:127096667 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00182 1 1363103 1364524 Trre1g00182 1 1363103 1364524 ECH