Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00179 ATGGCACAAAGAAAGCCATCATTTCGTTTTAGAATACCTTCTTGGCTATCAGGAACACCTGAATCGATGTCTCGCCGTTCGAAAGACTCGTCAAAATCAACTTCTCGATCAGACACAAATGTTCCTATTCAAAGACCATCTAGGCCTTCTCTCATAACTCCTGCAGAGTTACCTCCAATTCCTGCCAAAACTCAAGAAAAACCTAGAATTGAACCTCTAAACCAATCGCCGCCTCATCCAACTCAACCAACGCCATTATCAACTTCAGTGATTGTTGAGACTACTAACTCAAAACCCCCTTCTCCATCAATATCATCTAACCATGTCACCTCTCCACCCTCGCCATCTCATGCAGCATCTCAGGTTGATGTTGTCTCAACTCAACCTCAGTCTCCTTTTCATTATGACACCATGAAGGAGCCAAAGCTTTCTTCTACTGAAGAAAACACTCATCCTTCACCATCTGCATCTGAACAAGAAAAGGAAAAAATGGTCAACAAGTATGAACCAATGCAACAAGAAGCTGAAGCTGAGCCTGAGCTGAATAGGAATTCACCGTTGATAGAAATCACCAAGTCACCACATCATGTAGGCTCCGAACAACAAGCTTCTTTTATGCCCTCCTCGCCCCAAGTTTCTAAAATCGAACCAGCTTCCCAGCACCATCCACCGTCTTCTTTGGCCTCGGTGCAGAATGAGGTGTTAAAGGCTAACCATGAAGAAAACTCTTTTTATACGTCATCTACCTCTCAAGAACAAAAAGAGAAGATTCCAGTTACAGTGTCTGAGCCATTGCCAAATGAAGAAGAACGAAAGATGAACTCACCATCGAAAATAATTCCGGTATCACAACCAGAGAAACTGTCTAAGCACACAAAAGCAAATTTAGATGAGGAAAAATCAATCTCAACAAAAACACCACCAAAGTCCCCTTTGGAAACTCAAAGAAATTTCCTTCAACATAAAGACAAGGAGAAAGTTATGCATGAAAGCAAAAAGGTAGGAAAAGCCAAAGACAAAAGTACTAACCAGCCGAATCGACATACCAAACCATCTTCTTCAGGCACAAAGGATAAGAAGCAGCATGGTGTAAAAGAAACTGTAGAGAGAAAGATAATGTTTGCCACATCAAACTCTAGCGGAAAAGACATAGGAGTTTTGAGCTCAAAAGATCCTAGCTCAAGCATATCAAACCAAAGAAATGCTCCATCGAGCGACGAAAGGGAAAAGAGAAATGAAAAGGAAAAGGGTCCAATTCAAAAAGGTATCAAAGATGATATCACAATGTTTGTTCATAAGATATCAGCATCAGTGCAACCAACACAGCCTATGGAGGACAAAAAATTTAGTGTCATAACATTGACCGGTGACAATAGAGGAGCCACAATGCATGTTGGTTCTGAGTCAGATAATAAAGAAGGTTCAATCCATATTCATAGGGCCTACAAGAATGAATCTGAAGAGAGCATTGATGTGACAACAGATGGAGAAGGAAACACTAACAATGACGAAGAAAACTCAATGGAGCACAGTGAGGTTGGGAAGGCTTATGTTAACAGCAACATACAAAGTATCAACAATTCACTCATGTTTCATGGTTCAATCAATGAAAGAGACCCTGGAGTTCAAGTTACACTTCCAAAAAAGCCCTCACAAACCATCAACCGCGATGAAAAAGACACTCACAATCAAAGGACTGAGTTTAACGTTAGCCGGTCGCAGAAGTCAACGTTCCAGCCAACGGTTCGGCGTTATGGTTGCAAGTTCAGAAGTGGCAATAACAATGAAGACATTGAGATTATGTGA 1806 0.4114 MAQRKPSFRFRIPSWLSGTPESMSRRSKDSSKSTSRSDTNVPIQRPSRPSLITPAELPPIPAKTQEKPRIEPLNQSPPHPTQPTPLSTSVIVETTNSKPPSPSISSNHVTSPPSPSHAASQVDVVSTQPQSPFHYDTMKEPKLSSTEENTHPSPSASEQEKEKMVNKYEPMQQEAEAEPELNRNSPLIEITKSPHHVGSEQQASFMPSSPQVSKIEPASQHHPPSSLASVQNEVLKANHEENSFYTSSTSQEQKEKIPVTVSEPLPNEEERKMNSPSKIIPVSQPEKLSKHTKANLDEEKSISTKTPPKSPLETQRNFLQHKDKEKVMHESKKVGKAKDKSTNQPNRHTKPSSSGTKDKKQHGVKETVERKIMFATSNSSGKDIGVLSSKDPSSSISNQRNAPSSDEREKRNEKEKGPIQKGIKDDITMFVHKISASVQPTQPMEDKKFSVITLTGDNRGATMHVGSESDNKEGSIHIHRAYKNESEESIDVTTDGEGNTNNDEENSMEHSEVGKAYVNSNIQSINNSLMFHGSINERDPGVQVTLPKKPSQTINRDEKDTHNQRTEFNVSRSQKSTFQPTVRRYGCKFRSGNNNEDIEIM 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00179 601 MobiDBLite consensus disorder prediction 352 369 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 1 426 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 552 566 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 539 579 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 316 345 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 488 509 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 290 304 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 154 176 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 403 426 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 195 257 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 372 402 - -
Trre1g00179 601 MobiDBLite consensus disorder prediction 85 134 - -
Trre1g00179 601 PANTHER OS01G0106600 PROTEIN 1 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00179 Trre-Chr1 1348433 1350238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00179 - - tpra:123886509 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00179 1 1348433 1350238 Trre5g05590 5 56177379 56178215 PCT