Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00136 ATGGATGCGGTGGTGACCGGCGTTACCATCGGTGTCGGACTCTCCACACCTCGTCATCTCTCGCATTTCTCCAAGAAACCTAACCGCCTCCACTCCTCCGCCGTCTCCGCCACCAGCAAATGGGCTGAACGACTCATTTCCGATTTCCAATTCCTCGGCGACACCACCTCTTCCTCATCTTCCACCACCTCCGCCGCCGTCACGCTCACTCCTTCTTTCCCTCCTCAACTCGATTCTCCTCCCATTGAACGCCACGTGTCACTCCCTCTCGACCTGTACAAAATTCTTGGCGCTGAAACGCATTTTCTCGGTGATGGCATTCGTAGAGCTTATGAAGCCAAATTCTCGAAGCCTCCTCAGTATGCTTTCAGTAACGAAGCTTTGATTAGCCGCCGCCAAATTCTTCAAGCCGCTTGTGAAACCCTAGCTGATCCTGCTTCAAGACGAGAGTACAATCAAAGCCTCATTGACGATGACGAGGATTCTTCCATTCTCACTGAAATCCCTTTCGATAAAGTTCCTGGAGCTCTTTGTGTGTTGCAGGAAGCTGGAGAGACTGAGTTGGTGCTTCAGACTGGAGGGGGTTTACTGAGAGAGAGGTTGCCGAAGACGTTTAAGCAAGATGTTGTGTTGGCTATGGCGCTTGCTTATGTTGATGTTTCAAGGGATGCTATGGCTTTCTCCCCACCGGATTTCATTGTGGCTTGTGAGATGCTCGAGAGGGCATTGAAGCTTTTGCAGGAAGAAGGGGCAAGCAGCCTAGCACCGGATTTACAAACACAAATTGACGAGACACTCGAAGAGATAACCCCACACTGTGTATTAGAACTTTTAGCCTTGCCTCTTGATGATGAACATCGAGCACAAAGAGAAGAAGGTCTCCAAGGTGTCCGCAACATTCTATGGGCAGTTGGAGGTGGAGGAGCAGCAGCAATTGCTGGGAGTTTCACACGTGAAGATTTCATGAATGAGGCATTCCTGCATATGAAAGCAACCGAACAGGTCGAACTTTTTGTAGCAACACCTAGTAATATTCCAGCTGAAAGTTTTGAGGCATATGGGGTGGCACTTGCATTGGTTGCACAAGCCTTTGTAGGTAAAAAGCCACATCTTATCCAAGATGCTGATAACTTATTCCATCAACTTCAACAAACTAAGGTAACAAATATGAGGAATGCTCCCTCTGTTTATACTCCAATGGAGATGGAGAAGAGGGAGGTTGATTTCGCATTAGAAAGGGGCCTATGTGCACTGCTTGTTGGAGAGCTCGATCAGTGCCGGTCATGGTTGGGACTCGACAGTGACAGCTCTCCTTATCGAAACCCATCTATTATAGACTTTATTATGGAAAATGCAAAGGGTGATGAAGACAGTGATCTTCCTGGACTCTGTAAATTGTTGGAGACATGGTTGATGGAGGTGGTTTTCCCCAGGTTTAGAGATACTAAAGACATAAGCTTTAAGCTTGGAGATTACTATGATGACCCCACAGTGCTAAGATATCTAGAGAGGCTTGAGGGTGCTGGTCGTTCACCCCTGGCTGCTGCAGCAGCCATAGCAAAAATCGGAGCGGAGGCTACTGCTGTTATTGGCCATGTCCAGGCTAGTGCAATAAAAGCATTAAAGAGGGTATTTCCTGTTGGCTCCAAAGACAAAATCTTGACCCATCAAGAAAATGGTGAAAAGGATCATTCAAGCCTTTCTGAAAATGAGGATCCCCTGATATTATCAGATCATGACAGTTCAGTTGATGTTGAGGTTTCAGGAATAAAAAATACTGCTGAGATAAATGATGGAAAATCTATTACTGATGACATTAAAAATGCAAGTGTGAATATCATGTGTGCTGGCGTGGTAATTGGACTCATAACTTTAGCTGGCTTGAAGTTTTTACCTGCTAGGAATGGCTCACCCATTCTTCGCAAAATGACTGATTCAACAATGGCGTCGAATACTATTAATTTAGGTCCTGTAGGGGATGAAGAATTAGGAGAGCAACTACCAAAAATGAATGCAAGGGTTGCAGAAGCTCTAGTGCGCAAGTGGCAAAACATCAAATCCCAAGCTTTTGGACCAGACCATTGCCTAGGAAGTTTGCAAGAGGTGTTGGACGGTGAAATGTTGAAGATATGGACTGATCGAGCAGCTGAGATTGCCGAGCTTGGTTGGTCATATGACTACAACTTGGAGGATCTCAACATAGATAGTGTGACTATATCACAGAATGGGCGGCGTGCAGTGGTGGAAACAACTCTCAAAGAGTCTACCCACCTCAACGCTGTTGGTCATCCACAACATGATGCTTCTAACAGCAGAACCTACACAACAAGATATGAAATGTCTTTTTCAGATTCAGGGTGGAAAATTGTTGAAGGAGCTGTCCTTGAGTCATAG 2394 0.4591 MDAVVTGVTIGVGLSTPRHLSHFSKKPNRLHSSAVSATSKWAERLISDFQFLGDTTSSSSSTTSAAVTLTPSFPPQLDSPPIERHVSLPLDLYKILGAETHFLGDGIRRAYEAKFSKPPQYAFSNEALISRRQILQAACETLADPASRREYNQSLIDDDEDSSILTEIPFDKVPGALCVLQEAGETELVLQTGGGLLRERLPKTFKQDVVLAMALAYVDVSRDAMAFSPPDFIVACEMLERALKLLQEEGASSLAPDLQTQIDETLEEITPHCVLELLALPLDDEHRAQREEGLQGVRNILWAVGGGGAAAIAGSFTREDFMNEAFLHMKATEQVELFVATPSNIPAESFEAYGVALALVAQAFVGKKPHLIQDADNLFHQLQQTKVTNMRNAPSVYTPMEMEKREVDFALERGLCALLVGELDQCRSWLGLDSDSSPYRNPSIIDFIMENAKGDEDSDLPGLCKLLETWLMEVVFPRFRDTKDISFKLGDYYDDPTVLRYLERLEGAGRSPLAAAAAIAKIGAEATAVIGHVQASAIKALKRVFPVGSKDKILTHQENGEKDHSSLSENEDPLILSDHDSSVDVEVSGIKNTAEINDGKSITDDIKNASVNIMCAGVVIGLITLAGLKFLPARNGSPILRKMTDSTMASNTINLGPVGDEELGEQLPKMNARVAEALVRKWQNIKSQAFGPDHCLGSLQEVLDGEMLKIWTDRAAEIAELGWSYDYNLEDLNIDSVTISQNGRRAVVETTLKESTHLNAVGHPQHDASNSRTYTTRYEMSFSDSGWKIVEGAVLES 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00136 797 Pfam ARC6-like, IMS domain 675 789 IPR025344 -
Trre1g00136 797 MobiDBLite consensus disorder prediction 556 575 - -
Trre1g00136 797 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 28 796 IPR044685 -
Trre1g00136 797 SUPERFAMILY Chaperone J-domain 89 157 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00136 Trre-Chr1 1038910 1044060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00136 - - gmx:100790455 1231.47