Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00114 ATGGAGTTTCTTGTGCTTTTTTCTCTCTTTCTAATCTTTATTCTATTCATCATCCATATACACAAATCAAATAGTACTAGTAGAACATCATCAACTCCACCAGGTCCTAAACCACTTCCTATAATTGGAAATCTACACCAAATTGACCCTTCATCACCACATCAATCCTTATGGCAACTTTCCAAACAATATGGACCTATCATGTATTTGCACCTTGGCTATATCCCAACCTTAGTTATTTCTTCATCAAAAATGGCAAAAGAAGTGTTGCAAACTCATGACCTTAAATTTGCAAGTAGACCATCTTTCGTAGGACTAAAAAAATTGTCTTATAATGGTTTAGATTTGGCTGTGGCACCTTATAGCCCTCATTGGAAAGAAATGAAAAAACTTAGTGTTCTTCATCTCTTTAGCTCTCAACGTGTTCATTCTTTTAGACCTATTAGAGAAAATGAAGTTGCCCAATTGATTCAAAAGGTGTCAAAATATGTTGGTAATGAAAAAGGTGTGAACTTGAGTGAAACAATGATGTCTTTCACAAATACACTTATATGTAAGATAGCTTTAGGGAAAAAATATGTTTTTGATCATGATGAAGAAGTTGAATTGGGAAGTGATCAAAGGAGAAGTGGATTGCAAATTTTGCTTAATGAAACTCAAGCTTTGTTGGCTGAATTTTACTTTTCAGATCATTTTCCTTTGTTGGGTTGGGTTGATAAAGTCAAAGGAACTCTTAGGAGGCTTGATAAAACTTTCAAGGAATTGGATTTGATATACCAACGAGTCATTGATGACCATATGGATAATTTAGAAAGGCCTAAAAGCAAGGAACAAGAAGTGGCTGATATCATTGATATATTATTGAAGATGATGAATGATCATTCACTTTCTTTTGAGCTCACTATTGACCACATCAAAGCTTTGCTTATGAACATCTTTATAGCAGGAACCGATACAAGTACAGCTATAGTGGTTTGGGCAATGACAGCATTGATGAACAATCCTAGAGTGATGAACAAGGTTCAAATGGAAATCAGAAACTTATATGAGAACAAAAATTTCATAAATGAAGATGATATTGAAAAACTTTCTTATCTTAAATCAGTGGTCAAAGAGACATTGAGATTATTCCCTCCATCACCATTACTATTGCCAAGAGAAACAATGGAAAATTGTAACATAGATAGTTATGAGATTAAACCAAAGACTCTAGTGTATGTTAATGCATGGGCCATAGGAAGAGATCCTGAGAATTGGGAAGACCCCGAAAAGTTTTATCCAGAAAGATTCTTCACAAGTTCGGTGGATTTTAAAGGGAATAATTTTGAGTTGATTCCATTTGGAAGTGGAAGAAGAATGTGTCCTGCAATGAACATGGGAATGCTCACTGTTGAGCTTTCACTTGCTAATCTTATTCACTCTTTTGATTGGAAATTGCCTAATGAATTTAATAAGGAGCAAGTGTTGGATACAAAGGTGAAACCAGGAATAACTATGCATAAAAAAATTGATCTTTATCTTGTTCCAAAGAAAAGAAAACCATAA 1545 0.3417 MEFLVLFSLFLIFILFIIHIHKSNSTSRTSSTPPGPKPLPIIGNLHQIDPSSPHQSLWQLSKQYGPIMYLHLGYIPTLVISSSKMAKEVLQTHDLKFASRPSFVGLKKLSYNGLDLAVAPYSPHWKEMKKLSVLHLFSSQRVHSFRPIRENEVAQLIQKVSKYVGNEKGVNLSETMMSFTNTLICKIALGKKYVFDHDEEVELGSDQRRSGLQILLNETQALLAEFYFSDHFPLLGWVDKVKGTLRRLDKTFKELDLIYQRVIDDHMDNLERPKSKEQEVADIIDILLKMMNDHSLSFELTIDHIKALLMNIFIAGTDTSTAIVVWAMTALMNNPRVMNKVQMEIRNLYENKNFINEDDIEKLSYLKSVVKETLRLFPPSPLLLPRETMENCNIDSYEIKPKTLVYVNAWAIGRDPENWEDPEKFYPERFFTSSVDFKGNNFELIPFGSGRRMCPAMNMGMLTVELSLANLIHSFDWKLPNEFNKEQVLDTKVKPGITMHKKIDLYLVPKKRKP 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00114 514 SUPERFAMILY Cytochrome P450 33 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 Coils Coil 338 358 - -
Trre1g00114 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Trre1g00114 514 Gene3D Cytochrome P450 18 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 Pfam Cytochrome P450 33 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 CDD CYP71-like 63 505 - -
Trre1g00114 514 FunFam Cytochrome P450 83B1 19 508 - -
Trre1g00114 514 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00114 514 PANTHER CYTOCHROME P450 71B11-RELATED 15 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00114 Trre-Chr1 806587 808775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00114 9 511 Cytochrome P450 AT3G26300 44.862 7.06e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00114 - - gmx:606704 653.669