Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00111 ATGGGGTTTATCATACTTCTTTCTCTCTTGCCAATCTTTATTCTATTCATTATCCATATACACAAAAGAAGAAGAACATCATCAACTCCACCAGGTCCTAAACCGCTTCCTATAATTGGAAATCTACACCAAATTGACCCTTCATCCCCACACCACTCCCTATGGCAACTTTCCAAACAATATGGACCTATCATGTCTTTGCACCTTGGCAATATACCAACCTTAGTTGTTTCCTCAGCAAGAATGGCAAAAGAAGTGTTGAAAACACATGACCTTAAATTTGCAAGTAGACCATCTTTCCTAGGAGTAAGGAAATTGTCTTACAATGGTTTAGATTTGGGGTTTGCACCTTATAGTCCTTATTGGAGAGAAATGAAAAAAATTTGTGTTCTTCACCTTTTTAGCTCTCAACGTGTTCATTCTTTTAGACCCATTAGAGAAAATGAAGTTGCCCAATTGATTCAAAAGTTGTCAAAATATGATGGTGATGAAAAAGGTGTGAACTTGAGTGAAACAATGATGTCTTTCACAAATACAATTATATGTAAGATGGCTTTTGGGAAAAAATATGATTTTGATTATGAGGAAGAAGTTGAATTGGGAAATGGACAAAGGGGAAGTAGATTGCAAGTTTTGCTTAATGAAGCTCAAGCATTGTTAACAGAATTTTTCTTTTCGGATAGTTTTCCTTTGTTGGGTTGGGTTGATAGAGTTAGAGGAACTCTCAGGAGGCTTGATAAAACTTTTAAGGAATTGGATTTGATATACCAAAGAGTCATTGATGACCATATGGATAATTTAGCAATGCCTAAAAGCAAAGAATAA 825 0.3539 MGFIILLSLLPIFILFIIHIHKRRRTSSTPPGPKPLPIIGNLHQIDPSSPHHSLWQLSKQYGPIMSLHLGNIPTLVVSSARMAKEVLKTHDLKFASRPSFLGVRKLSYNGLDLGFAPYSPYWREMKKICVLHLFSSQRVHSFRPIRENEVAQLIQKLSKYDGDEKGVNLSETMMSFTNTIICKMAFGKKYDFDYEEEVELGNGQRGSRLQVLLNEAQALLTEFFFSDSFPLLGWVDRVRGTLRRLDKTFKELDLIYQRVIDDHMDNLAMPKSKE 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00111 274 SUPERFAMILY Cytochrome P450 30 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00111 274 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00111 274 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00111 274 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00111 274 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 268 - -
Trre1g00111 274 Pfam Cytochrome P450 30 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g00111 274 Gene3D Cytochrome P450 22 274 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00111 Trre-Chr1 797177 798001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00111 1 265 Cytochrome P450 AT4G31500 43.019 8.12e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00111 - - tpra:123887119 463.381