Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00085 ATGATAGGATCCTTTCTTACCTGGGCGCTTGTGAGTGTTTTTGGATATGCTTATCCAGCTTATGAATGCTATAAAGTAGTTGAAAAGAATAAGCCGGAAATTGAACAACTTCGATTTTGGTGCCAATATTGGATTTTGGTTGCTGTTTTGACAGTGTGTGAGAGATTTGGGGATACATTAATATCATGGGTTCCAATGTATAGCGAAGCTAAGTTGGCTTTTTTCATATTTTTGTGGTACCCCAAGACAAAGGGAACAACATATGTATATGATTCCTTCTTTAGACCATATGTTGCAAAACATGAGCCAGAAATTGATCGGAGCTTGATGGAACTAAGGACGAGGGCCGGCGATTATGTAGTTTTATATTGTCAAAGAGCTGCTAGTTATGGTCAGACGAGAATATATGACATTTTGAAGTTTGTTTCAGCACAATCAACACCAGCACCTCGTCCTGCTCAGCAACGACCAGGTATGAGGGTCCGTAAAGCTGCACCTGCCAAGAGCCAACCAGCGGCTGCTACAGAGCCACAAGTTGAGGAACCCCCATCTCCTGCCTCTAGCACAACTTCAAGTCAGTTCCAGAAGGAAGTAGCTGAGGAATTGGAGTCTCCACAAGCTCCTAAAGCAGCCCCTCCACAAGCTACTAAAGCAGCTCCTCCCGTTGCAGGTTTAAATAAACAGAAGTCTTCTGTAGCAGGTTTAAATAAACAGAAGTCTTCTGTAGCGGATTTAAATAACCAAAAGCCACCCGTAGCTGGTTTAAAAACTCAAAAGTCATCTGTTGCAAGTTTAATTACCCAAAAGTCTGCTCCTACATCCGAAACAATGACCATATCTTCATCAACAGAGTCAGACTCAAAGAAGATTGAACCTGCGTCACCTTCATCCTCTTCAGCAAGTGAAAATGGAAAATCTCCTAAAAAGGAGACCATAATGGAAGAAAGCATTCGGGTTACGCGGGGCAGACTAAGAAAAACCCGATCAGCAGGAACCCAGTAG 1002 0.4281 MIGSFLTWALVSVFGYAYPAYECYKVVEKNKPEIEQLRFWCQYWILVAVLTVCERFGDTLISWVPMYSEAKLAFFIFLWYPKTKGTTYVYDSFFRPYVAKHEPEIDRSLMELRTRAGDYVVLYCQRAASYGQTRIYDILKFVSAQSTPAPRPAQQRPGMRVRKAAPAKSQPAAATEPQVEEPPSPASSTTSSQFQKEVAEELESPQAPKAAPPQATKAAPPVAGLNKQKSSVAGLNKQKSSVADLNNQKPPVAGLKTQKSSVASLITQKSAPTSETMTISSSTESDSKKIEPASPSSSSASENGKSPKKETIMEESIRVTRGRLRKTRSAGTQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00085 333 PANTHER HVA22-LIKE PROTEINS 10 142 IPR004345 -
Trre1g00085 333 MobiDBLite consensus disorder prediction 229 306 - -
Trre1g00085 333 MobiDBLite consensus disorder prediction 307 322 - -
Trre1g00085 333 MobiDBLite consensus disorder prediction 147 333 - -
Trre1g00085 333 Pfam TB2/DP1, HVA22 family 19 97 IPR004345 -
Trre1g00085 333 MobiDBLite consensus disorder prediction 181 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00085 Trre-Chr1 588498 590570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00085 - K17338 gmx:100783207 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00085 1 588498 590570 Trre1g00085 1 588498 590570 ECH
Trre1g00085 1 588498 590570 Trre5g05670 5 56770584 56772231 PCT