Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00084 ATGTCTGGTGATAATGAATCCAAGAGTTCGAGATTGACATGGGAAGGTTGCAGCGTATTGCTTGATATCAACGACGGTGATCGTCTCGTTTTTGCTCGTCTTTCTCCTGCTGCGAAATTGAAGATTGGAAATAAGAATTGTTCATTGCAGCCATTGATCGGTTGTCCCTTTGGAACTGTTTTTCAACTTGATTCTTCCTCTGACGGTGCTCCTTTTCTATCCCCTTTCCAACCTAAAGGTAATGTTAATAACACTGAAGAAATAAAAGACGGTCAATGCCAACCTGAGTCAAAAGATGGTCAACTCAGTGGTGAGTCGAAGGACAACCGGTCGTTGATTGACAATAATACTGCCCAAAGCCTCACCGGTGAAGATATAGAAGACATGCGAAGGCAGGGTGCTAAGGGTAATGAAATAATAGATGCTTTGATTGCCAATAGCGCAACATTTGATAAGAAAACATCATTCTCACAGGAGAAATATAGACTTAAGAAGCAGAAGAAATATGCACCAAAAGTACTTATAAGGCGTCCTGTAGCTCGAAGTATATGTGAGGCCTATTTCAAGAAGTATCCATTGAAAATTGGATTCTTGCGGGTGGACACATTGTCCCTTCTACTTTCAATGGCTAATGTTTCTTCAAATTCTGACATTCTCGTTGTTGACATGGTCGGTGGCCTTCTTACTGGTGCTGTGGCAGAACGTTTAGGAGGTACTGGTTTTGTATGCAACTCATACCTTGGACAAGCACCCTCCATGGATATTGTGAGGATATTTAATTTAAGCGATGAAATCTGCAAGAGAATTGTAAGGACTTCAATTTCTGACTTGTTGTCACAAAAGGAATCACCTGAACAAAATCCAAAACACGATGTTGGCAGTGTGGAAAGTCAGTCAAATGATCAAATGAGTGCATCAGTCAGCATGGAGGAAATCTCTCATTCATCAGAAAATGTAATTTCTGATCTTGGTGCTGAGAATGCTGAGAATAGCTCTTTTCCTGCTCTAAGAGCTTGCAAAGCTATAAAAGCTGGAGAAAAAGCATCTCAAGAAATGATTGACTCGTGGAAGGAAAATGGTTTTTCCAGCCTAATTATTGCTGCACCAGACTTGGATACATGGACATTGGTTAAAGACCTCTTACCACTTTTATCAAACTCTGCCCCATTTGCTATTTATCATCAATATCTTCAGCCACTGGCAACTTGCATGCACAATCTACAGCTTGAGAAAATGGCCATTGGATTGCAAATAACAGAGCCTTGGCTACGCGAATACCAGGTACTTCCATCAAGAACTCACCCGTGCATGCAAATGAGTGCATTTGGGGGCTACATTCTCAGTGGGACAAAGATCTGTAATAGCTGA 1368 0.4123 MSGDNESKSSRLTWEGCSVLLDINDGDRLVFARLSPAAKLKIGNKNCSLQPLIGCPFGTVFQLDSSSDGAPFLSPFQPKGNVNNTEEIKDGQCQPESKDGQLSGESKDNRSLIDNNTAQSLTGEDIEDMRRQGAKGNEIIDALIANSATFDKKTSFSQEKYRLKKQKKYAPKVLIRRPVARSICEAYFKKYPLKIGFLRVDTLSLLLSMANVSSNSDILVVDMVGGLLTGAVAERLGGTGFVCNSYLGQAPSMDIVRIFNLSDEICKRIVRTSISDLLSQKESPEQNPKHDVGSVESQSNDQMSASVSMEEISHSSENVISDLGAENAENSSFPALRACKAIKAGEKASQEMIDSWKENGFSSLIIAAPDLDTWTLVKDLLPLLSNSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQITEPWLREYQVLPSRTHPCMQMSAFGGYILSGTKICNS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00084 455 MobiDBLite consensus disorder prediction 279 308 - -
Trre1g00084 455 MobiDBLite consensus disorder prediction 72 126 - -
Trre1g00084 455 Pfam Gcd10p family 18 291 IPR017423 GO:0030488|GO:0031515
Trre1g00084 455 MobiDBLite consensus disorder prediction 290 308 - -
Trre1g00084 455 PIRSF TRM6 4 455 IPR017423 GO:0030488|GO:0031515
Trre1g00084 455 PANTHER TRANSLATION INITIATION FACTOR EIF3-RELATED 4 455 IPR017423 GO:0030488|GO:0031515
Trre1g00084 455 MobiDBLite consensus disorder prediction 72 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00084 Trre-Chr1 579171 584576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00084 K03256 - gmx:100783601 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00084 1 579171 584576 Trre1g00084 1 579171 584576 ECH