Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00047 ATGGAAAAAATTCCTTCAGACATACTAGCTGAAGAGTTGGGTATCAAGGGGTATGTCCCTGCATATTTGGATCCAAATCTCAAATCAAGTGATCTTCTTACAGGCGTAGGTTTTGCCTCCGGAGCTTCAGGATATGATCCTTTAACACCAAAAATAGCGTCGGTGATACCATTATCTGCTCAACTAGAAATGTTCAAAGAATACATAGGAAAGCTTAAAGGCATTGTTGGAGAGAAAACAACAAACTTCATACTAGCCAACAGTCTTTTTCTTGTGGTGGGAGGTAGTGACGACATTGCCAACACTTATTATGTTGTTCATGCCAGATTGCAATATGACATTCCTGCTTACACAGACCTTATGTCCAATTCAGCCATTAATTTTGTAAAGGAAATACATAAACTTGGAGCTCGTAGAATTGCTGTACTGAGTGCACCACCAATTGGATGTGTTCCATCACAGAGAACTCTAGCAGGAGGGATTGTAAGAGAATGTGCAGAAAAGTATAATGATGCAGCAAAGTTATTCAATGCCAAAATATCAAAGGAGCTTGATTCCCTCAGTCACAGCTCACCCAATAGCAGGATTGTTTACATTGATGTTTACACCCCTCTACTTGATATCATTCTCAACTACCAAAAATATGGGTACAAAGTTGTGGACAGAGGTTGTTGTGGCACAGGCAAATTAGAGGTTGCAGTGTTATGTAACCCATTTGATGCTACTTGTTCTGATGCATCTGAATATGTCTTTTGGGATAGTTACCATCCTACTGAACGAGTATACAGACAGCTCGTAGATATAGTCCTTCAAAAATATTTGAACAGATTGATATGA 837 0.3919 MEKIPSDILAEELGIKGYVPAYLDPNLKSSDLLTGVGFASGASGYDPLTPKIASVIPLSAQLEMFKEYIGKLKGIVGEKTTNFILANSLFLVVGGSDDIANTYYVVHARLQYDIPAYTDLMSNSAINFVKEIHKLGARRIAVLSAPPIGCVPSQRTLAGGIVRECAEKYNDAAKLFNAKISKELDSLSHSSPNSRIVYIDVYTPLLDIILNYQKYGYKVVDRGCCGTGKLEVAVLCNPFDATCSDASEYVFWDSYHPTERVYRQLVDIVLQKYLNRLI 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00047 278 PANTHER GDSL ESTERASE/LIPASE EXL3 3 267 - -
Trre1g00047 278 SUPERFAMILY SGNH hydrolase 89 271 - -
Trre1g00047 278 Pfam GDSL-like Lipase/Acylhydrolase 8 266 IPR001087 GO:0016788
Trre1g00047 278 CDD SGNH_plant_lipase_like 3 273 IPR035669 -
Trre1g00047 278 Gene3D SGNH hydrolase 2 274 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00047 Trre-Chr1 343084 346005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00047 3 277 Pollen Coat Proteome AT1G75910 35.484 4.69e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00047 - - ahf:112759151 457.988