Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00046 ATGGAAAAGATTTTCAAGGTGGTGTTCCAAGTGGTCGATTTTGCAATGGAAAAAATTCCTTCAGACATACTAGCTGAAGAGTTGGGTATCAAGGGGTATGTCCCTGCATATTTGGATCCAAATCTCAAATCAAGTGATCTTCTTACAGGCGTAGGTTTTGCCTCCGGAGCTTCAGGATATGATCCTTTAACACCAAAAATAGCGTCGGTGATACCATTATCTGCTCAACTAGAAATGTTCAAAGAATACATAGGAAAGCTTAAAGGCATTGTTGGAGAGAAAACAACAAACTTCATACTAGCCAACAGTCTTTTTCTTGTGGTGGGAGGTAGTGACGACATTGCCAACACTTATTATGTTGTTCATGCCAGATTGCAATATGACATTCCTGCTTACACAGACCTTATGTCCAATTCAGCCATTAATTTTGTAAAGGAAATACATAAACTTGGAGCTCGTAGAATTGCTGTACTGAGTGCACCACCAATTGGATGTGTTCCATCACAGAGAACTCTAGCAGGAGGGATTGTAAGAGAATGTGCAGAAAAGTATAATGATGCAGCAAAGTTATTCAATGCCAAAATATCAAAGGAGCTTGATTCCCTCAGTCACAGCTCACCCAATAGCAGGATTGTTTACATTGATGTTTACACCCCTCTACTTGATATCATTCTCAACTACCAAAAATATGGGTACAAAGTTGTGGACAGAGGTTGTTGTGGCACAGGCAAATTAGAGGTTGCAGTGTTATGTAACCCATTTGATGCTACTTGTTCTGATGCATCTGAATATGTCTTTTGGGATAGTTACCATCCTACTGAACGAGTATACAGACAGCTCGTAGATATAGTCCTTCAAAAATATTTGAACAGATTGATATGA 882 0.3923 MEKIFKVVFQVVDFAMEKIPSDILAEELGIKGYVPAYLDPNLKSSDLLTGVGFASGASGYDPLTPKIASVIPLSAQLEMFKEYIGKLKGIVGEKTTNFILANSLFLVVGGSDDIANTYYVVHARLQYDIPAYTDLMSNSAINFVKEIHKLGARRIAVLSAPPIGCVPSQRTLAGGIVRECAEKYNDAAKLFNAKISKELDSLSHSSPNSRIVYIDVYTPLLDIILNYQKYGYKVVDRGCCGTGKLEVAVLCNPFDATCSDASEYVFWDSYHPTERVYRQLVDIVLQKYLNRLI 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00046 293 SUPERFAMILY SGNH hydrolase 104 286 - -
Trre1g00046 293 Gene3D SGNH hydrolase 9 289 IPR036514 -
Trre1g00046 293 PANTHER GDSL ESTERASE/LIPASE EXL3 15 282 - -
Trre1g00046 293 Pfam GDSL-like Lipase/Acylhydrolase 21 281 IPR001087 GO:0016788
Trre1g00046 293 CDD SGNH_plant_lipase_like 18 288 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00046 Trre-Chr1 343084 346050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00046 14 292 Pollen Coat Proteome AT1G75910 35.336 2.09e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00046 - - ahf:112759151 458.759