Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00044 ATGGAGAAGTTAATGTGGGTGAGATTAGTGACAATATTTCTTGTTTTATTTGGTAGAGTATCTAACATTGCAATTGCACAAACTACCAATCCACAATATCCTGCGGTGTTTGCATTTGGTGACTCAATCTTTGACACGGGAAATAATAACGGACTTTTCACCGCATCTAAGTGTAACTTTCCTCCGTATGGAAAGGATTTCTACGGAGGACAGGCTACCGGGAGATTCGGTAACGGCAGAGTTCTATCAGATTTGATAACTTCGGCTTTGAGTGTGAAAGCGACATTGCCAGCAGCCTTGAATCCATCTTTAACGCCGCAAGACCTTGTTACCGGGGTATGCTTTGCATCAGGTGGTTCTGGTTTTGATGATTTGACAGCAAACTTGCAGGGAGGAGTATTGACAATGGGGGCACAATTGAGATTATTCGAACAATACATAGAGAGGCTGAGAGCAATTGTTGGAGCCGAAAAGGCAGCAGATATCATATCCAAAGCTTTGTTTATAATATCAGCAGGAAACAATGATGTTGCATTTGCTTATTCTTTTACTATAAGGCATGTTTTGCCTTTCAATGTATATGGTGGTCAATTAGTTGGCGCAGCTCAAAATTTTCTTAAGAGTCTATATCAATTGGGCGCACGACACGTGTGGGTTTTTAGTACACTGCCATTGGGATGCTTACCAGCAGCTAGAACATTAACAGGACCATTAAGGTTATGTGTAGATTATGAGAATATATTGGCACAACAATTCAATGGTTGGTTAGCGAATGGGCTTGCAGCTGTTAAAAGCTCACTTCCAGATTATGATCTTAGATTCGCAGATGTGTATACTCCAATGCTACGTCTCATACAGAATCCATCAGCAGCAGGGTTTGCAAATGTGTGGAATGGATGCTGTGGAACAGGAACATTTGAAATGGGACCAGCATGTAACTTGTTTACATTCCAATGTCCAAGTGATCAAGCATACTTCTTTTGGGATGTTGCTCATCCTACTGAGAGAGCTTATCAAGCCACTGTTGGTATATTGTTACACCAACAAAACTACGATCTTACTAGTTACAATATTTCCCAAACTCTTCATCCTTTGAATGTATCAAATCTTATCTTTTAA 1119 0.403 MEKLMWVRLVTIFLVLFGRVSNIAIAQTTNPQYPAVFAFGDSIFDTGNNNGLFTASKCNFPPYGKDFYGGQATGRFGNGRVLSDLITSALSVKATLPAALNPSLTPQDLVTGVCFASGGSGFDDLTANLQGGVLTMGAQLRLFEQYIERLRAIVGAEKAADIISKALFIISAGNNDVAFAYSFTIRHVLPFNVYGGQLVGAAQNFLKSLYQLGARHVWVFSTLPLGCLPAARTLTGPLRLCVDYENILAQQFNGWLANGLAAVKSSLPDYDLRFADVYTPMLRLIQNPSAAGFANVWNGCCGTGTFEMGPACNLFTFQCPSDQAYFFWDVAHPTERAYQATVGILLHQQNYDLTSYNISQTLHPLNVSNLIF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00044 372 PANTHER GDSL ESTERASE/LIPASE EXL3 16 341 - -
Trre1g00044 372 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Trre1g00044 372 Gene3D SGNH hydrolase 23 349 IPR036514 -
Trre1g00044 372 CDD SGNH_plant_lipase_like 34 347 IPR035669 -
Trre1g00044 372 Pfam GDSL-like Lipase/Acylhydrolase 36 340 IPR001087 GO:0016788
Trre1g00044 372 SUPERFAMILY SGNH hydrolase 36 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00044 Trre-Chr1 334968 336483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00044 10 348 Pollen Coat Proteome AT1G75910 38.728 1.07e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00044 - - mtr:11422775 597.816