Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00040 ATGACATGTTCTCGGTGGCTTTGTTCTCTTCGTATATCAGGTAGATCACGAAAAAAATGTGTGGAGGAAGATGGCTTGCGTAGCAAGCCAAACGTAAATGAAGAATATCTCCAAACATTTAGAACAGAGTCTTATTTGGAAATATGCAACAAAGCACAAGGCCAATTTCGGAAGAAAATTAGCACCAAAAGACTCTCTTCCTCTTCTTCAACATCTTCTCCTCTTCCTCCCATATGCTTGAATCTCACCGAGTCATTGCTTGAACCACGACAAGAAATCATTGCAAACTTGACACAAAATTTCAAGGTGCATAATCTTCTAGTGGACTATTTCGAAGCTAGCTTAGAAGCATGTCGTTATTGTGACACAATCCTTGAAGGAATCCACTCAACAAGACTTTCTTATACAAGAATCACAAGAGTTGTTAAGCTAAGCAAAAAGGTATTAATAAGTTTCAATGATAGCACCAATGAACAAACAAAAAAGGATATATACAAAGAGCTTGATTCATTTTCATCAAAACTACAAAATAACCCTTTGTCCTTTATTAGCACAATGCAATTCCATGACATTCACAATAAATACATGGAACTTCTTCAAAGATTAACATCAAAGAGAAAAAGAATTAAAAGAAGATTAACAATGATAAGTGTTTGCAAGAAAATTGGAGGAATTGCTCTTGTTACTTCACATGGTGCCATTCTTATTGCTTTATTAGTGGTTTCTTTACATAGTGTTGTTGGGTTGGTGGCTGCACCAAGTATTGTTGGTGGTTTAGTTGGTTTATTCATAAATAGAATCAAAATTAGAATAAAGAAAACAACAAAGTGTGAAAGATTATGTGAACAACTTGATGCTGCTGCAAAAGGGGTTTTTATATTGATAAATGATTTGGATACTATGAGTAGAATGGTGAAGAGATTGAATGATGAGGTGGAACATAGGAAAATGATTGCTGATGTTTGTGTGAAAAATGTTGGTAGTAAATGTGAAATATTGAAACGTGTTATGAGTGAATTTAGTGATCATGATGGTAGCTTTTTGGAGCAGTTGGAAGAGCTTGAAGAACATGTTTACTTGTGCTTTCTCACTGTTAACAAATCCAGGAGACTTGTTATGCAACAAATTACAGAGAGATCACAACATTAA 1149 0.3464 MTCSRWLCSLRISGRSRKKCVEEDGLRSKPNVNEEYLQTFRTESYLEICNKAQGQFRKKISTKRLSSSSSTSSPLPPICLNLTESLLEPRQEIIANLTQNFKVHNLLVDYFEASLEACRYCDTILEGIHSTRLSYTRITRVVKLSKKVLISFNDSTNEQTKKDIYKELDSFSSKLQNNPLSFISTMQFHDIHNKYMELLQRLTSKRKRIKRRLTMISVCKKIGGIALVTSHGAILIALLVVSLHSVVGLVAAPSIVGGLVGLFINRIKIRIKKTTKCERLCEQLDAAAKGVFILINDLDTMSRMVKRLNDEVEHRKMIADVCVKNVGSKCEILKRVMSEFSDHDGSFLEQLEELEEHVYLCFLTVNKSRRLVMQQITERSQH 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00040 382 Coils Coil 192 212 - -
Trre1g00040 382 Pfam Protein of unknown function (DUF677) 95 376 IPR007749 -
Trre1g00040 382 PANTHER UPF0496 PROTEIN 3-RELATED 24 377 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00040 Trre-Chr1 305849 307466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00040 - - mtr:11420426 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00040 1 305849 307466 Trre1g00040 1 305849 307466 ECH