Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00033 ATGAGACGAAAATGGCCAAGTGTTTGGAATTTAATGGAAAATTTCAAACTGAAACCGAAAACGGAAAACGTTTGTGGGTGGCGTTTATTGCACGAGGGTCCAGACACCGTCGAGGAGCTTCTCGATAGGCATCTAGTCAAGAAAGTTAATAATAACGACGACGACGAAGAAGAAGACGAGTTGTTGAATCGGAGGCGACTCACCAGCACTCGCCGAGAGGCACTCAGTCTTTACAGAGACATTCTTCGTGCATCACGCTTTTTCACATGGCCTGATTCCAAAGGCGTTCTCTGGCGTGATCTTCTTAGAGATAGCGCTCGTAAAGAGTTCGAACTCGCCCGATTTGAAACCGACCCGGAAATTGTCACCCGCTTGCTTATTGGTGGACGTGAGGCTGTTCACAACGCTATCGATAAGCTCGCCGAGAAGCAGAGGCAACAGATTCAAAAGGATCGTGGCGGTGCCGGTCATGATCAAACCTGA 483 0.4845 MRRKWPSVWNLMENFKLKPKTENVCGWRLLHEGPDTVEELLDRHLVKKVNNNDDDEEEDELLNRRRLTSTRREALSLYRDILRASRFFTWPDSKGVLWRDLLRDSARKEFELARFETDPEIVTRLLIGGREAVHNAIDKLAEKQRQQIQKDRGGAGHDQT 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00033 160 CDD Complex1_LYR_LYRM7 74 134 IPR045298 GO:0034551
Trre1g00033 160 PANTHER COMPLEX 1 PROTEIN CONTAINING PROTEIN, EXPRESSED 10 155 - -
Trre1g00033 160 Pfam Complex 1 protein (LYR family) 72 132 IPR008011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00033 Trre-Chr1 269800 270282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00033 - - psat:127098687 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00033 1 269800 270282 Trre1g00033 1 269800 270282 ECH