Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00027 ATGGCTTCAATGACACAGTACTACTGCACCAATTTCATATGCAAACCCTCCATCCCTCCTTCTATTTCAACACATCCTAAGGTCCTTTCCCTTCGTCCTTCTCTACCCAATTTTCACACAAGAAACCATTCTCGTATTGGAGCCTCTCATCACCACAGACGTGTTTTTATCACCAAAGCAACAGCAGCTCCTCCTTCAGGTGCTGAAGCTGCTGCCAAGAAAAAAGATGAAAGAGTTCAGCGAGTCCACAGCATAGAAGAATTCGATGAAGCACTTCAATCAGCAAAAGACAAACTCGTTGTTGTTGAATATGCCACCAGCGAAGATACAGAGAGCATCGAGATATACCCTTTCTTAGTCGACCTCAGTCGAACCTGTAACGACGTCAAATTCTTACTTGTTATGGGAGACGAATCAGAGAAAACAAAAGAACTCTGCAAAAGAGAGAAAGTAGATAAAGTACCTCACTTCACTTTCTACAAAAGCAAAGAAAAGATTCACGAAGAAGAAGCTATTGGTCCAGATACACTTGTTGGAGATGTGTTATACTACGGTGACAACCATTCTGCTGTGGTGCAACTGCATAACAGAGAGGATGTTGAGAAACTTATTGAGGATCATAAGGTTGATCATAAACTTATTGTCCTTGATGTTGGACTCAAACATTGTGGGCCGTGTGTTAAGGTTTATCCAACAGTGATTAAGCTGTCGAGACAAATGAGCGATACGGTTGTGTTTGCAAGGATGAATGGAGATGAGAATGATAGCTGTATGCAGTTTTTGAAGGACATGGAAGTGATTCAGGTGCCTACTTTTTTGTTCATAAGAGATGGTAAGATTGATGGAAGGTATGTTGGTTCAGGAAAAGGAGAACTCATTGGTGAAATCCTTAGGTACCAAGGGGTGCGTGTCACTTATTAA 921 0.4148 MASMTQYYCTNFICKPSIPPSISTHPKVLSLRPSLPNFHTRNHSRIGASHHHRRVFITKATAAPPSGAEAAAKKKDERVQRVHSIEEFDEALQSAKDKLVVVEYATSEDTESIEIYPFLVDLSRTCNDVKFLLVMGDESEKTKELCKREKVDKVPHFTFYKSKEKIHEEEAIGPDTLVGDVLYYGDNHSAVVQLHNREDVEKLIEDHKVDHKLIVLDVGLKHCGPCVKVYPTVIKLSRQMSDTVVFARMNGDENDSCMQFLKDMEVIQVPTFLFIRDGKIDGRYVGSGKGELIGEILRYQGVRVTY 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00027 306 Gene3D Glutaredoxin 67 182 - -
Trre1g00027 306 SUPERFAMILY Thioredoxin-like 71 173 IPR036249 -
Trre1g00027 306 SUPERFAMILY Thioredoxin-like 185 293 IPR036249 -
Trre1g00027 306 PANTHER THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 6 306 IPR044192 GO:0016671
Trre1g00027 306 Gene3D Glutaredoxin 184 300 - -
Trre1g00027 306 ProSiteProfiles Thioredoxin domain profile. 160 302 IPR013766 -
Trre1g00027 306 Pfam Thioredoxin 83 169 IPR013766 -
Trre1g00027 306 Pfam Thioredoxin 202 291 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00027 Trre-Chr1 229739 230659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00027 - - cam:101508233 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00027 1 229739 230659 Trre1g00027 1 229739 230659 ECH