Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00026 ATGGCGACGCCACCAGCAGCAGTTAAAGTGTACGGACCAGCCTTGTCCACCGCCGTTTCAAGAGTGCTGGCATGTCTGAACGAGAAAGACATCCCATTTCAACTCATCTCTCTCAACATGTCCAAAGGAGAACACAGAAACCCTGATTTCCTCAAAATCCATCCCTTTGGCCAAGTACCTGCATTTCAAGATGACCACATATCTCTCTTCGAGTCTAGAGCGATATGCCGGTACGTTTGTGAGAAACACGGAGACAAAGGAAACAAGGAACTGTACGGTAAGAATCCACTGGCCAAGGCTTCCATTGATCAATGGTTGGAGGCTGAAGGACAGAGCTTCAACCCACCCTCTTCAACTCTTGTGTTTCAGCTAGCATTTGCTCCTCGAATGAAGATCAACCAAGACCAAGGAGCAATCAGACAGAGTAAAGATAAGCTGAAGAAAGTGCTTGATGTGTACGATAAGAGGCTCGGTGAAACTCGTTACTTGGCCGGTGATGAATTCACGCTAGCTGACCTTTCGCATCTTCCCAATATTCATTACTTGGTGGCTTCTGCCGATGATGACACGGCTGCTCTGTTCACCTCTTCAAGAGAAAATGTGTCCAGGTGGTGGACGGAAATATCCATTCGAAACTCATGGACAAAGGTCATTGATTTGCACCCTAAACCTTGA 675 0.4696 MATPPAAVKVYGPALSTAVSRVLACLNEKDIPFQLISLNMSKGEHRNPDFLKIHPFGQVPAFQDDHISLFESRAICRYVCEKHGDKGNKELYGKNPLAKASIDQWLEAEGQSFNPPSSTLVFQLAFAPRMKINQDQGAIRQSKDKLKKVLDVYDKRLGETRYLAGDEFTLADLSHLPNIHYLVASADDDTAALFTSSRENVSRWWTEISIRNSWTKVIDLHPKP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00026 224 Gene3D Glutaredoxin 6 93 - -
Trre1g00026 224 CDD GST_C_Phi 97 218 IPR034347 -
Trre1g00026 224 Pfam Glutathione S-transferase, C-terminal domain 119 209 IPR004046 -
Trre1g00026 224 SUPERFAMILY GST C-terminal domain-like 88 218 IPR036282 -
Trre1g00026 224 SUPERFAMILY Thioredoxin-like 5 87 IPR036249 -
Trre1g00026 224 PANTHER GLUTATHIONE S-TRANSFERASE RHO 7 219 - -
Trre1g00026 224 SFLD Glutathione Transferase (cytosolic) 6 219 IPR040079 -
Trre1g00026 224 SFLD Main.5: Phi-like 6 219 - -
Trre1g00026 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 87 IPR004045 -
Trre1g00026 224 FunFam Glutathione S-transferase F2 93 218 - -
Trre1g00026 224 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Trre1g00026 224 Gene3D - 94 218 - -
Trre1g00026 224 CDD GST_N_Phi 7 82 - -
Trre1g00026 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 95 224 IPR010987 -
Trre1g00026 224 FunFam Glutathione S-transferase F2 7 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00026 Trre-Chr1 226349 227240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00026 10 221 Glutathione S-transferase Gene Family AT2G47730 46.226 2.40e-63 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00026 K00799 - zju:107422694 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00026 1 226349 227240 Trre1g00026 1 226349 227240 ECH