Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05514 ATGGCAAGCGCAAATGTAGTTGTTAGTGTTGGTGAAGCTGAAGAACACAATAATAATAATAATAAGCTGATTCTGTATTCATATTGGAGGAGTTCATGTTCCTTCCGAGTCCGAATTGCTCTCAACTTCAAAGGCCTCAAATATGACTACAAACCAGTCAATCTCTTGAAGGGAGAACAATATCATCCTGAGTTTCTCCAGCTCAACCCTGTTGGTCTTGTTCCTGTTCTCGTCGATGGTCCTGTTGTAATTTCCGACTCTTTCGCTATTATTATGTATTTGGAGGATAAGTATCCTCAACATCCTTTGCTCCCTACTGATATTCACAAAAGAGCACTCAATTTCCAGGCTGTCAGTATTGTTACTTCATCAATACAACCTCTTCAAAACCTAACTCTCCTGAAGTTCATCGAGGCAAAAGTTGGCCCTGATGAGAAACTTCCATGGGTCCAGAGTGTAATTAGAAAAGGCTTCACAGCTCTTGAAAAGCTATTGAAAGAACACACTGGGAGGTATGCTACTGGAGATGAAGTTTCCATGGCGGATATATTTTTAGCACCTCAGTTACACGCTGCAGTTAAGAGATTCAACATTGACATGAATGAGTTCCCTACTCTATTAAGATTACACGAGACATATTATGAGATCCCAGCATTCCGGGAGGCTTTGCCAGAGAATCAGCCAGATGCAGCAGGCTAG 699 0.4149 MASANVVVSVGEAEEHNNNNNKLILYSYWRSSCSFRVRIALNFKGLKYDYKPVNLLKGEQYHPEFLQLNPVGLVPVLVDGPVVISDSFAIIMYLEDKYPQHPLLPTDIHKRALNFQAVSIVTSSIQPLQNLTLLKFIEAKVGPDEKLPWVQSVIRKGFTALEKLLKEHTGRYATGDEVSMADIFLAPQLHAAVKRFNIDMNEFPTLLRLHETYYEIPAFREALPENQPDAAG 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05514 232 SFLD Main (cytGST) 24 212 - -
Trre16g05514 232 Gene3D Glutaredoxin 20 105 - -
Trre16g05514 232 SUPERFAMILY Thioredoxin-like 16 105 IPR036249 -
Trre16g05514 232 CDD GST_C_Zeta 109 227 IPR034330 -
Trre16g05514 232 Gene3D - 106 232 - -
Trre16g05514 232 NCBIfam maleylacetoacetate isomerase 24 230 IPR005955 GO:0003824|GO:0005737|GO:0009072
Trre16g05514 232 Pfam Glutathione S-transferase, N-terminal domain 22 95 IPR004045 -
Trre16g05514 232 FunFam Maleylacetoacetate isomerase 106 232 - -
Trre16g05514 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 21 102 IPR004045 -
Trre16g05514 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 107 232 IPR010987 -
Trre16g05514 232 SFLD Glutathione Transferase (cytosolic) 24 212 IPR040079 -
Trre16g05514 232 Pfam Glutathione S-transferase, C-terminal domain 147 220 IPR004046 -
Trre16g05514 232 CDD GST_N_Zeta 23 95 IPR034333 -
Trre16g05514 232 PANTHER MALEYLACETOACETATE ISOMERASE 23 230 - -
Trre16g05514 232 FunFam Glutathione S-transferase Z1 21 105 - -
Trre16g05514 232 SUPERFAMILY GST C-terminal domain-like 102 229 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05514 Trre-Chr16 57650572 57653455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05514 22 230 Glutathione S-transferase Gene Family AT2G02380 63.636 2.62e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05514 K01800 - gmx:547590 328.176