Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05507 ATGTGGTCTCTAAAGCATTCAGTTTTATTCTTCATCATTCTTTTTTGTTCTCTATTCCAATCATCTGTTTTCGCATTCAAAAAGTCTTACATAGTGTACTTGGGATCACATGAGCATGATGAAGGAGTTACACAGGCTGATTTCGATCGAGTTACAGAAACTCATCATGAATTTCTTCAATCCTACGTAGGAAGTCTTGAGAAAGCAAGAGAGGCAATGATATATTCTTACACAAGGAATATCAATGGCTTTGCTGCAATCCTTGAAGAGAAAGAAGCTGCTGAGATTGCAGAGCATCCAGAGGTTGTGTCAGTGTTGTTAAATCGAGGAAGAAAGTTACACACAACACATTCGTGGGAGTTCATGTCAATGGAACACAATGGTGTGGCTCCTTACGAGTCACTCTTTAGAAAAGCCAGATACGGTGAAGATGTTATAATTGGGAATCTTGACACTGGTGTATGGCCAGAATCTCCAAGCTTTAGAGATGAAGGGATGGGTCCCATTCCCTCAAGGTGGAAAGGAAAATGTCACAGCACTGACTTCCGTTGCAACAGGAAACTGATAGGAGCAAGGTACTTCAACAAAGGTTATTTGGCCTATGCAGGGCTAACGGGAACAAAAAACCACACGCTTAACAATGCACGAGACTATGAAGGTCATGGATCTCACACACTGTCAACAATAGGAGGAAACTTTGTTTATGGAGCTAATGTTTTTGGTTTCGGCAATGGAACTGCCAAAGGTGGTTCTCCAAAAGCCAGAGTTGCTACTTACAAAGTGTGTTGGCCAAAAATTGGTAACAATGAATGTTTTGATGCTGATATCATGGCAGCCGTTGATATGGCTATTCATGACGGAGTAGATGTTCTTTCCGTTTCTCTTGGAGGTGTTCCTGATGATTACTTTGATGATGGCGTTTCAATTGCTGCATTTCATGCTGTTAAGAAAGGTATCACTGTAGTGTGTTCAGCTGGAAATGATGGACCAACTCCTGGAACTGTTGTAAATGTTGCACCTTGGATATTAACTGTTGCTGCAAGCACCTTAGATAGAGAGTTTGATAGTGGTGTTCAACTCCATAATGGACAAAGATTTAGGGGAGCAAGCCTTTCTATAGCTTTGCCAGAAAACAAGTTTTACCCACTCATTACTGCCGCCGATGCAAAATTGGCAGATGCACCTGTTGAAAACGCTACGCTATGTCAGAAAGGAACAATTGACCCTAAAAAAGCAAAGGGACACATCTTAGTTTGTCTTAGAGGTATTTCTGCAAGATTGGAAAAGAGCCTTGTTGCTTTTGAGGCTGGAGCAGTTGGAATGATTCTTTGTAATGACCAAGATAGTGGCAATGAGCTCATTGCTGATCCTCATTTCCTTCCATCATCACAAATCACTTATGAAGATGGTGTTGCTGTCTTTGCCTACATCAATTCAACCAAGAATCCGCTAGGATATATTCATCCACCCGTAACAAAGTTGAACATAAAGCCTGCTCCAAGCATGGCTGCTTTCTCCTCTAGAGGCCCCAACAAAGTCACACCAGAGATTCTCAAGCCTGATATAACTGCACCCGGTGTGAACATTATTGCTGCCTACTCAGGAGCAATTAGCCCTACAGAGATGGGCGTTGATAAACGCAGGATTCCCTACATCACAATGTCTGGAACATCCATGTCATGTCCTCATGTGGCCGGAGTTGTTGGCCTTCTCAAGACTCTCCACCCTGACTGGAGTCCATCAGCTATTAAATCAGCAATTATGACAACTGCTAGGACAAGGAGCAACAGTGGTAAACCAATCCTTGATGACAGTAATGTGAAGGCAACACCATTTTCCTATGGCTCAGGTCACATTCGACCAAACCGTGCCATGGATCCTGGCTTGGTCTATGAGTTGAACATCAAAGATTACCTAAACTTTCTTTGTTTCATTGGTTATAACCAGACACAAATTAGCATGTTCTCTGGCACTCAATATCATTGTGATGATATAAACATCTTGGATTTCAATTACCCTACAATAACAATACCACAACTCTATGGTTCAGTCACTTTGAGTAGGAAGGTGAAAAATGTTGGTTCGCCAGGCACATACAATGCAACCTTGCGTGCACCAGCAGGAGTTTCCATATTTGTGCAGCCAAAGATGTTGAAATTTGACAAGATTGGTGAAGAAAAGAGTTTTAATTTGACAATTGAAGTTAAAAGATCAGGTTTGGCTACTGTATTTGGAAGCCTAACTTGGTCAGATGGCAGACACTATGTTAGGAGTCCAATTGTAGTTGGAGGAGTTAAAGGTTAA 2304 0.4175 MWSLKHSVLFFIILFCSLFQSSVFAFKKSYIVYLGSHEHDEGVTQADFDRVTETHHEFLQSYVGSLEKAREAMIYSYTRNINGFAAILEEKEAAEIAEHPEVVSVLLNRGRKLHTTHSWEFMSMEHNGVAPYESLFRKARYGEDVIIGNLDTGVWPESPSFRDEGMGPIPSRWKGKCHSTDFRCNRKLIGARYFNKGYLAYAGLTGTKNHTLNNARDYEGHGSHTLSTIGGNFVYGANVFGFGNGTAKGGSPKARVATYKVCWPKIGNNECFDADIMAAVDMAIHDGVDVLSVSLGGVPDDYFDDGVSIAAFHAVKKGITVVCSAGNDGPTPGTVVNVAPWILTVAASTLDREFDSGVQLHNGQRFRGASLSIALPENKFYPLITAADAKLADAPVENATLCQKGTIDPKKAKGHILVCLRGISARLEKSLVAFEAGAVGMILCNDQDSGNELIADPHFLPSSQITYEDGVAVFAYINSTKNPLGYIHPPVTKLNIKPAPSMAAFSSRGPNKVTPEILKPDITAPGVNIIAAYSGAISPTEMGVDKRRIPYITMSGTSMSCPHVAGVVGLLKTLHPDWSPSAIKSAIMTTARTRSNSGKPILDDSNVKATPFSYGSGHIRPNRAMDPGLVYELNIKDYLNFLCFIGYNQTQISMFSGTQYHCDDINILDFNYPTITIPQLYGSVTLSRKVKNVGSPGTYNATLRAPAGVSIFVQPKMLKFDKIGEEKSFNLTIEVKRSGLATVFGSLTWSDGRHYVRSPIVVGGVKG 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05507 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Trre16g05507 767 FunFam Subtilisin-like protease SBT5.3 19 114 - -
Trre16g05507 767 SUPERFAMILY PA domain 409 480 IPR046450 -
Trre16g05507 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 114 IPR037045 -
Trre16g05507 767 Pfam PA domain 401 471 IPR003137 -
Trre16g05507 767 CDD PA_subtilisin_like 358 487 - -
Trre16g05507 767 Pfam Fibronectin type-III domain 669 762 IPR041469 -
Trre16g05507 767 CDD Peptidases_S8_3 112 591 IPR034197 -
Trre16g05507 767 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Trre16g05507 767 Gene3D - 642 764 - -
Trre16g05507 767 Pfam Subtilase family 142 617 IPR000209 GO:0006508|GO:0008236
Trre16g05507 767 Gene3D Peptidase S8/S53 domain 144 638 IPR036852 GO:0004252|GO:0006508
Trre16g05507 767 FunFam subtilisin-like protease SBT1.5 351 494 - -
Trre16g05507 767 FunFam Subtilisin-like protease SBT1.5 144 376 - -
Trre16g05507 767 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Trre16g05507 767 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Trre16g05507 767 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Trre16g05507 767 SUPERFAMILY Subtilisin-like 113 629 IPR036852 GO:0004252|GO:0006508
Trre16g05507 767 FunFam Subtilisin-like protease SBT1.5 642 764 - -
Trre16g05507 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 762 IPR045051 -
Trre16g05507 767 Gene3D - 351 494 - -
Trre16g05507 767 ProSiteProfiles Serine proteases, subtilase domain profile. 118 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05507 Trre-Chr16 57608826 57613150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05507 17 762 Subtilisin-like Serine Gene Family AT5G59810 63.515 0.0 973
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05507 - - gmx:100808488 1173.3