Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05499 ATGATGCCAATGAAGAAGAAGCTTGATATTGATGATGATCGGTGCTTTCACTACTACAATCATGAATCCGATGAAGAAAACATGTCCGGTTGTGGTTGCGGTTTTATTGGGTTAAGGAAAAGTCAAGTGTTTGATGATTACAATTTCATTACCGAGATAGAAGATGATGATGATGGAGATTCGGATGAAGAGCTATTTGAGATAAATCTGAAGAAGGAAGAAGCATTGGATTCAATAAGAGAAGTAGATGAAGAAGAGTTTGAGAGCAGTAGTAGTAGTAGTACTGTGTTCTCTCTTGATATCCATAACAATAAATTAGATGATGATGATGTTGTTTATGTGGCAGTTGGAGAAAGTAGTTGTTGTTCAAGTATGGAAGCTCTTTCATGGGCCTTGAAAAACTCTGTCACACCTAATTCTACTATTGTCTCTCTTATACATGTTTTCCCTCAAGTCAAGCTAATTCCAACTCCATTGGGAAAAATGCCAAGGACTCATGTAAATGAAGAGCATGTTAACATCTACTTGACCCAAGAGAAAAGCAAGAGGAAAATACTCCTTCAAAAGTTCATTGACCTATGTATTGATTCAAAGGTTAAGGTGGAGGTGTTGCTTATTGAGGGTGACAACGTTGCTAAAGCCATTGTGGACCTTGTAGGGAATCTAAATATAAGGAAATTGGTGATTGGAACTACCCAATCTAATCTAAGAAAACATGTTTCAAGAAGGCAAAATTCGATTGCGGACATGGTGTTAAAAACTATACAAGAAAGTTGTGATGTCAAAATCATATGTGAAGGAAAAGAAGTGATTGATCAGATGATGGTTAATGGTTGCACTTCACAACACTCCAAAGAATCCCATGATTTGGTTCCACTCAAGGGTTTGATGCCTAATTTATTTTGGTCCCGATTTTTATGA 921 0.3681 MMPMKKKLDIDDDRCFHYYNHESDEENMSGCGCGFIGLRKSQVFDDYNFITEIEDDDDGDSDEELFEINLKKEEALDSIREVDEEEFESSSSSSTVFSLDIHNNKLDDDDVVYVAVGESSCCSSMEALSWALKNSVTPNSTIVSLIHVFPQVKLIPTPLGKMPRTHVNEEHVNIYLTQEKSKRKILLQKFIDLCIDSKVKVEVLLIEGDNVAKAIVDLVGNLNIRKLVIGTTQSNLRKHVSRRQNSIADMVLKTIQESCDVKIICEGKEVIDQMMVNGCTSQHSKESHDLVPLKGLMPNLFWSRFL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05499 306 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 114 240 - -
Trre16g05499 306 Gene3D HUPs 106 270 IPR014729 -
Trre16g05499 306 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 65 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05499 Trre-Chr16 57513800 57515648 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05499 109 267 U-box Gene Family AT2G45910 30.061 1.53e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05499 - - tpra:123908796 444.891