Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05497 ATGTCGGCCAAGTCAACGGAGGCCTTGCAGCAGCAGCATTCCAACTCATCTTCCCAAATAATGTTCAACCACAACTACGGCACCTCCGGCGTGTGTGAGATCACAGAGGAGGAAGTCCAGACAATCAACCACCATCAGCTTGATAATGAAATTGAAGAAGAAGAGTGTGTTTATGTGGCAGTTGGTAAGAGTGATACAAGCATGGAAGCACTCTCATGGACACTCAATAACTTGATTACTCATCACTCTACCAACACCATGCTCTATCTCATACATGTTTTCCCAGAAATCAAACACATTCCACATCCATTGGGAGTAGGAATGATTGCAAGGAATCAGGTGAGTGCTGAGCAAGTGGAGATTTATATGGACCAAGAAAGAGACAAGAGGAGACAACTCCTTCACAAGTTCCTCCATTCTTGCTCTCTTTCTAAGGTTAAGGTGGACACCATCCTAATAGAGAGTGACTTGGTTGCTAAGGCCATCCTTGACCTTATTCCCATTCTTCAAATCACTAATTTAGTCATTGGTGTCAACAAATTCAATCTAAGAAAATCAAGATCAAAGAAAGGAAATGGTGGTGTTGCTGATCAGGTAGTGCAGAATGCACCACAAAATTGCAAGGTTAGAGTTATTTGTGAAGGTAAGGAAGTGAATGAGCAAATGATGATGATGATGTCACCCTTACCCTCTCCTCAGATAATTACCACTACTACCAACTCTGCAAATAATGATACTTCGGTGAACACTAAAGAAAATGATTCTGTTTTATGTGTTTGTTTCAAGCCAAAGTTTAAATAA 801 0.4095 MSAKSTEALQQQHSNSSSQIMFNHNYGTSGVCEITEEEVQTINHHQLDNEIEEEECVYVAVGKSDTSMEALSWTLNNLITHHSTNTMLYLIHVFPEIKHIPHPLGVGMIARNQVSAEQVEIYMDQERDKRRQLLHKFLHSCSLSKVKVDTILIESDLVAKAILDLIPILQITNLVIGVNKFNLRKSRSKKGNGGVADQVVQNAPQNCKVRVICEGKEVNEQMMMMMSPLPSPQIITTTTNSANNDTSVNTKENDSVLCVCFKPKFK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05497 266 Gene3D HUPs 45 224 IPR014729 -
Trre16g05497 266 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 58 209 - -
Trre16g05497 266 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 16 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05497 Trre-Chr16 57499908 57501030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05497 37 219 U-box Gene Family AT5G65500 29.101 1.27e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05497 - - gmx:100527773 295.049