Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05496 ATGTTCAACCACAACTACGGCACCTCCGGCGTGTGTGAGATCACAGAGGAGGAAGTCCAGACAATCAACCACCACCAGCTTGATAATGAAATTGAAGAAGAAGAGTGTGTTTATGTGGCAGTTGGTAAGAGTGATACAAGCATGGAAGCACTCTCATGGACACTCAATAACTTGATTACTCACCACTCTACCAACACCATGCTCTATCTCATACATGTTTTCCCAGAAATCAAACACATTCCTCATCCATTGGGAGTAGGAATGATTGCAAGGAATCAGGTGAGTGCTGAGCAAGTGGAGATTTATATGGACCAAGAAAGAGACAAGAGGAGACAACTCCTTCACAAGTTCCTCCATTCTTGCTCTCTTTCCAAGGTTAAGGTGGACACCATCCTAATAGAAAGTGACTTGGTTGCTAAAGCCATCCTTGACCTTATTCCCATTCTTCAAATCACTAATTTAGTCATTGGTGCCAACAAATTCAATCTAAGAAAATCAAGATCAAAGAAAGGAAATGGTGGTGTTGCTGATCAGGTAGTGCAGAATGCACCACAAAATTGCAAGGTTAGAGTTATTTGTGAAGGTAAGGAAGTGAATGAGCAAATGATGATGATGATGTCACCCTTACCCTCTCCTCAGATAATTACCACTACTACCAACTCTGCAAATAATGATACTTCGGTGAACACTAAAGAAAATGATTCTGTTTTATGTGTTTGTTTCAAGCCAAAGTTTAAATAA 741 0.4035 MFNHNYGTSGVCEITEEEVQTINHHQLDNEIEEEECVYVAVGKSDTSMEALSWTLNNLITHHSTNTMLYLIHVFPEIKHIPHPLGVGMIARNQVSAEQVEIYMDQERDKRRQLLHKFLHSCSLSKVKVDTILIESDLVAKAILDLIPILQITNLVIGANKFNLRKSRSKKGNGGVADQVVQNAPQNCKVRVICEGKEVNEQMMMMMSPLPSPQIITTTTNSANNDTSVNTKENDSVLCVCFKPKFK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05496 246 Gene3D HUPs 28 204 IPR014729 -
Trre16g05496 246 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 38 189 - -
Trre16g05496 246 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 6 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05496 Trre-Chr16 57496131 57497237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05496 34 221 U-box Gene Family AT1G01680 27.604 2.47e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05496 - - gmx:100527773 296.589