Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05426 ATGATTTCCATAGCTTTGCCATTATCCCTAATCACTTTCATTTTGATCTTCTTGGTTTCTATAACTTGTTGCTCTCAAGAAGATCGATCTATATACTTGGTCTTATTGGAAGGAGATGCGGTTGCATTTCATGGTGCTTCACAAAATGATGATTCGCCAATGGTTCACCTCACCAGAGAAGCTTCGAAGGCACATGAAAAACACTTATTGGCAACTCACAATATGCTTCTACAAAGCACTTTGAAGAATGGAAGCTACAATAAACTCCATAGCTACAAACACATAATTAATGGTTTCTCTGTCCACACAACACCTTCCCAGGCAAAAAGACTGAGAGCAACACCAGGAGTGAAGTTAGTAGAGAAAGATAGAGGAGTGAAACTAATGACAACATACACTCCTGATTTTCTTAAGTTACCACAAGGAGTATGGGCTCAAGAAGGAGGACAAAAAAATGCAGGTGATGGCGTTGTTATTGGTGTTATTGACAGTGGCATTAATCCACTTCATCCAAGCTTTGGTATCCAACATTTCACTTCAAATGTCTCTCACTTTTCTGGTGCTTGTGTCACTGGTCCACACTTTCCACCTGGTTCTTGCAATGGAAAGATTATTTCAGCTAAATATTTTTCAGCTGGTGCTCAAGCTATTGTTAACTTTAATGCTTCTGTGGATTTTCTTTCACCCTATGATGCTGATGGACATGGCAGTCATGTGTCATCTATTGCTGCTGGCAATGCTGATGTTCCTGTTATAGTGAATGATTTTTGCTATGGACGAGCCAGCGGAATGGCACCGCGTGCAAGGATTGCTGTTTATAAGGCTATCTTTCCATCTGTGGGAACTCTAGCAGATGTTGTCGCAGCTATCGATCAAGCTGTTCAAGATGGGGTAGATATCATATCACTATCTATTGGACCAAGTAAACCAACAGAAGATACATTGACATTTCTCAGTATCTTTGATATTACCTTATTATTTGCAAGAAAAGCGGGAGTTTTTGTGGCACAAGCTGCAGGTAATAGTGGTCCATCATCTTCAACTGTAGTGTCATTCAGTCCTTGGAGTGTCGGTGTTGCTGCGTGCAACACAGACAGAAGATATATTTCTTCAATTATTCTTGGAAATGGCACAATTGTTGATGGTGTTGGACTAACAGGACCAACTTTTGGAAATGGAACAGTTTTCCATAAACTTGTATTAGCAAAGGATGCAGTAAAAACAAATGGAACATTTCCAAAGACACCAGAGTACATAGAAGAGTGCCAACATCCAGAAGCTTTGGATCCTACTAAAGTGTTTGGAAGTGTCGTTATCTGCAACTTCTCAGAAGGATTCCTTAATGGCACCTCAACACTTTCTAACATTATCGACACCGCCAAGGCCCTAAAATTTGAGGGTTTTATTCTGACTGCAAACCCGAGCTATGGAGATTATATTGCAGAGGCAATTCCCTTTACTATTTCTGGTATCTTGATTTCTTCTGTAGCAGATTCCAAGGTTATAATGCAATATTATGAAAGTCGAACAAAGAGGGACGAGAAAGGAACTGTTACAGAATTTGGTGCTTGGGTATCTACAGGGGAAGGAAGGGTTGCCTCTTTCAAAGGGCGATCACCGGTTGTTAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGATGCAAACAGAAGTATCGCTGATGTGCTTAAACCTGATATTCTTGCTCCAGGACACCAGATATGGGGTGCATGGAGCCCTATTAGTGCCAAACTACCTATACTAACAGGACACAATTTTGCATTATTATCTGGTACCAGCATGGCGGCGCCTCATGTGGCTGGAATCGCAGCACTAATCAAGCAACATAATCCATCATGGACTCCATCTATGATAGCATCTGCAATCACCACAACAAGCTCAAAGTATGACAATCTTGGAGATCCTATGATGGCCGAAGGCTATGAGCCCCACTCATTGCATCATTCCACTCCTTTCGAATATGGGGCTGGCATTTTGAACCCCAGCCGTGCCATTGATCCAGGCCTGGTACTGTCAACAGATTATGTAGACTTCATCAGCTTCCTATGCTCTTTGCCAAACATCGATTTGGATACAATAACTACAGCAACGGGAGAACCTTGCAAGAGCCCATTTGACCATCCATCTCATTTAAACCTTCCATCAGTGACAATATCTGCACTGAAAGGATCAATTTATGTGAGAAGAACTGTGACGAATGTAGGGAACAGCACAGAGACATACCTAGGCTCTGTTCTAGCTCCTAACGGAACTACAGTTAACCTGAATCCAACTTGGTTTACCATAAGTCCACAAGGAACACAAGATCTGGATATACAAATCAATGTCGTTCAACCAATGGAAGATTTTCGCTTTGGTGAAATTGTTTTGACAGGAAGTATGGACCACATAGTAAGAATAACTTTGTCAGTTGTGCCAGTTTCAGCATAA 2451 0.4137 MISIALPLSLITFILIFLVSITCCSQEDRSIYLVLLEGDAVAFHGASQNDDSPMVHLTREASKAHEKHLLATHNMLLQSTLKNGSYNKLHSYKHIINGFSVHTTPSQAKRLRATPGVKLVEKDRGVKLMTTYTPDFLKLPQGVWAQEGGQKNAGDGVVIGVIDSGINPLHPSFGIQHFTSNVSHFSGACVTGPHFPPGSCNGKIISAKYFSAGAQAIVNFNASVDFLSPYDADGHGSHVSSIAAGNADVPVIVNDFCYGRASGMAPRARIAVYKAIFPSVGTLADVVAAIDQAVQDGVDIISLSIGPSKPTEDTLTFLSIFDITLLFARKAGVFVAQAAGNSGPSSSTVVSFSPWSVGVAACNTDRRYISSIILGNGTIVDGVGLTGPTFGNGTVFHKLVLAKDAVKTNGTFPKTPEYIEECQHPEALDPTKVFGSVVICNFSEGFLNGTSTLSNIIDTAKALKFEGFILTANPSYGDYIAEAIPFTISGILISSVADSKVIMQYYESRTKRDEKGTVTEFGAWVSTGEGRVASFKGRSPVVSRFSSRGPDIIDANRSIADVLKPDILAPGHQIWGAWSPISAKLPILTGHNFALLSGTSMAAPHVAGIAALIKQHNPSWTPSMIASAITTTSSKYDNLGDPMMAEGYEPHSLHHSTPFEYGAGILNPSRAIDPGLVLSTDYVDFISFLCSLPNIDLDTITTATGEPCKSPFDHPSHLNLPSVTISALKGSIYVRRTVTNVGNSTETYLGSVLAPNGTTVNLNPTWFTISPQGTQDLDIQINVVQPMEDFRFGEIVLTGSMDHIVRITLSVVPVSA 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05426 816 PRINTS Subtilisin serine protease family (S8) signature 231 244 IPR015500 -
Trre16g05426 816 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Trre16g05426 816 PRINTS Subtilisin serine protease family (S8) signature 597 613 IPR015500 -
Trre16g05426 816 SUPERFAMILY Subtilisin-like 44 694 IPR036852 GO:0004252|GO:0006508
Trre16g05426 816 ProSitePatterns Serine proteases, subtilase family, histidine active site. 235 245 IPR022398 -
Trre16g05426 816 Pfam Peptidase inhibitor I9 55 129 IPR010259 -
Trre16g05426 816 Gene3D Peptidase S8/S53 domain 156 685 IPR036852 GO:0004252|GO:0006508
Trre16g05426 816 CDD PA_subtilisin_like 371 513 - -
Trre16g05426 816 Gene3D - 689 813 - -
Trre16g05426 816 Pfam Fibronectin type-III domain 718 811 IPR041469 -
Trre16g05426 816 ProSiteProfiles Serine proteases, subtilase domain profile. 134 672 - -
Trre16g05426 816 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 129 IPR037045 -
Trre16g05426 816 CDD Peptidases_S8_3 126 634 IPR034197 -
Trre16g05426 816 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 159 170 IPR023827 -
Trre16g05426 816 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 80 809 IPR045051 -
Trre16g05426 816 Pfam Subtilase family 154 642 IPR000209 GO:0006508|GO:0008236
Trre16g05426 816 ProSitePatterns Serine proteases, subtilase family, serine active site. 598 608 IPR023828 -
Trre16g05426 816 Gene3D - 365 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05426 Trre-Chr16 57040589 57046089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05426 8 811 Subtilisin-like Serine Gene Family AT1G62340 59.515 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05426 - - psat:127138335 1301.19