Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05425 ATGGTCAAAATGATTTCCATAGCTTTGCCATTATCCCTAATCACTTTCATTTTGATCTTCTTGGTTTCTATAACTTGTTGCTCTCAAGAAGATCGATCTATATACTTGGTCTTATTGGAAGGAGATGCGGTTGCATTTCATGGTGCTTCACAAAATGATGATTCGCCAATGGTTCACCTCACCAGAGAAGCTTCGAAGGCACATGAAAAACACTTATTGGCAACTCACAATATGCTTCTACAAAGCACTTTGAAGAATGGAAGCTACAATAAACTCCATAGCTACAAACACATAATTAATGGTTTCTCTGTCCACACAACACCTTCCCAGGCAAAAAGACTGAGAGCAACACCAGGAGTGAAGTTAGTAGAGAAAGATAGAGGAGTGAAACTAATGACAACATACACTCCTGATTTTCTTAAGTTACCACAAGGAGTATGGGCTCAAGAAGGAGGACAAAAAAATGCAGGTGATGGCGTTGTTATTGGTGTTATTGACAGTGGCATTAATCCACTTCATCCAAGCTTTGGTATCCAACATTTCACTTCAAATGTCTCTCACTTTTCTGGTGCTTGTGTCACTGGTCCACACTTTCCACCTGGTTCTTGCAATGGAAAGATTATTTCAGCTAAATATTTTTCAGCTGGTGCTCAAGCTATTGTTAACTTTAATGCTTCTGTGGATTTTCTTTCACCCTATGATGCTGATGGACATGGCAGTCATGTGTCATCTATTGCTGCTGGCAATGCTGATGTTCCTGTTATAGTGAATGATTTTTGCTATGGACGAGCCAGCGGAATGGCACCGCGTGCAAGGATTGCTGTTTATAAGGCTATCTTTCCATCTGTGGGAACTCTAGCAGATGTTGTCGCAGCTATCGATCAAGCTGTTCAAGATGGGGTAGATATCATATCACTATCTATTGGACCAAGTAAACCAACAGAAGATACATTGACATTTCTCAGTATCTTTGATATTACCTTATTATTTGCAAGAAAAGCGGGAGTTTTTGTGGCACAAGCTGCAGGTAATAGTGGTCCATCATCTTCAACTGTAGTGTCATTCAGTCCTTGGAGTGTCGGTGTTGCTGCGTGCAACACAGACAGAAGATATATTTCTTCAATTATTCTTGGAAATGGCACAATTGTTGATGGTGTTGGACTAACAGGACCAACTTTTGGAAATGGAACAGTTTTCCATAAACTTGTATTAGCAAAGGATGCAGTAAAAACAAATGGAACATTTCCAAAGACACCAGAGTACATAGAAGAGTGCCAACATCCAGAAGCTTTGGATCCTACTAAAGTGTTTGGAAGTGTCGTTATCTGCAACTTCTCAGAAGGATTCCTTAATGGCACCTCAACACTTTCTAACATTATCGACACCGCCAAGGCCCTAAAATTTGAGGGTTTTATTCTGACTGCAAACCCGAGCTATGGAGATTATATTGCAGAGGCAATTCCCTTTACTATTTCTGGTATCTTGATTTCTTCTGTAGCAGATTCCAAGGTTATAATGCAATATTATGAAAGTCGAACAAAGAGGGACGAGAAAGGAACTGTTACAGAATTTGGTGCTTGGGTATCTACAGGGGAAGGAAGGGTTGCCTCTTTCAAAGGGCGATCACCGGTTGTTAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGATGCAAACAGAAGTATCGCTGATGTGCTTAAACCTGATATTCTTGCTCCAGGACACCAGATATGGGGTGCATGGAGCCCTATTAGTGCCAAACTACCTATACTAACAGGACACAATTTTGCATTATTATCTGGTACCAGCATGGCGGCGCCTCATGTGGCTGGAATCGCAGCACTAATCAAGCAACATAATCCATCATGGACTCCATCTATGATAGCATCTGCAATCACCACAACAAGCTCAAAGTATGACAATCTTGGAGATCCTATGATGGCCGAAGGCTATGAGCCCCACTCATTGCATCATTCCACTCCTTTCGAATATGGGGCTGGCATTTTGAACCCCAGCCGTGCCATTGATCCAGGCCTGGTACTGTCAACAGATTATGTAGACTTCATCAGCTTCCTATGCTCTTTGCCAAACATCGATTTGGATACAATAACTACAGCAACGGGAGAACCTTGCAAGAGCCCATTTGACCATCCATCTCATTTAAACCTTCCATCAGTGACAATATCTGCACTGAAAGGATCAATTTATGTGAGAAGAACTGTGACGAATGTAGGGAACAGCACAGAGACATACCTAGGCTCTGTTCTAGCTCCTAACGGAACTACAGTTAACCTGAATCCAACTTGGTTTACCATAAGTCCACAAGGAACACAAGATCTGGATATACAAATCAATGTCGTTCAACCAATGGAAGATTTTCGCTTTGGTGAAATTGTTTTGACAGGAAGTATGGACCACATAGTAAGAATAACTTTGTCAGTTGTGCCAGTTTCAGCATAA 2460 0.4134 MVKMISIALPLSLITFILIFLVSITCCSQEDRSIYLVLLEGDAVAFHGASQNDDSPMVHLTREASKAHEKHLLATHNMLLQSTLKNGSYNKLHSYKHIINGFSVHTTPSQAKRLRATPGVKLVEKDRGVKLMTTYTPDFLKLPQGVWAQEGGQKNAGDGVVIGVIDSGINPLHPSFGIQHFTSNVSHFSGACVTGPHFPPGSCNGKIISAKYFSAGAQAIVNFNASVDFLSPYDADGHGSHVSSIAAGNADVPVIVNDFCYGRASGMAPRARIAVYKAIFPSVGTLADVVAAIDQAVQDGVDIISLSIGPSKPTEDTLTFLSIFDITLLFARKAGVFVAQAAGNSGPSSSTVVSFSPWSVGVAACNTDRRYISSIILGNGTIVDGVGLTGPTFGNGTVFHKLVLAKDAVKTNGTFPKTPEYIEECQHPEALDPTKVFGSVVICNFSEGFLNGTSTLSNIIDTAKALKFEGFILTANPSYGDYIAEAIPFTISGILISSVADSKVIMQYYESRTKRDEKGTVTEFGAWVSTGEGRVASFKGRSPVVSRFSSRGPDIIDANRSIADVLKPDILAPGHQIWGAWSPISAKLPILTGHNFALLSGTSMAAPHVAGIAALIKQHNPSWTPSMIASAITTTSSKYDNLGDPMMAEGYEPHSLHHSTPFEYGAGILNPSRAIDPGLVLSTDYVDFISFLCSLPNIDLDTITTATGEPCKSPFDHPSHLNLPSVTISALKGSIYVRRTVTNVGNSTETYLGSVLAPNGTTVNLNPTWFTISPQGTQDLDIQINVVQPMEDFRFGEIVLTGSMDHIVRITLSVVPVSA 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05425 819 ProSiteProfiles Serine proteases, subtilase domain profile. 137 675 - -
Trre16g05425 819 ProSitePatterns Serine proteases, subtilase family, histidine active site. 238 248 IPR022398 -
Trre16g05425 819 Gene3D - 692 816 - -
Trre16g05425 819 Pfam Fibronectin type-III domain 721 814 IPR041469 -
Trre16g05425 819 Gene3D - 368 536 - -
Trre16g05425 819 PRINTS Subtilisin serine protease family (S8) signature 234 247 IPR015500 -
Trre16g05425 819 PRINTS Subtilisin serine protease family (S8) signature 157 176 IPR015500 -
Trre16g05425 819 PRINTS Subtilisin serine protease family (S8) signature 600 616 IPR015500 -
Trre16g05425 819 ProSitePatterns Serine proteases, subtilase family, serine active site. 601 611 IPR023828 -
Trre16g05425 819 Pfam Subtilase family 157 645 IPR000209 GO:0006508|GO:0008236
Trre16g05425 819 CDD PA_subtilisin_like 374 516 - -
Trre16g05425 819 Pfam Peptidase inhibitor I9 58 132 IPR010259 -
Trre16g05425 819 SUPERFAMILY Subtilisin-like 67 697 IPR036852 GO:0004252|GO:0006508
Trre16g05425 819 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 162 173 IPR023827 -
Trre16g05425 819 CDD Peptidases_S8_3 129 637 IPR034197 -
Trre16g05425 819 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 132 IPR037045 -
Trre16g05425 819 Gene3D Peptidase S8/S53 domain 159 688 IPR036852 GO:0004252|GO:0006508
Trre16g05425 819 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 83 812 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05425 Trre-Chr16 57040589 57046098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05425 11 814 Subtilisin-like Serine Gene Family AT1G62340 59.515 0.0 953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05425 - - psat:127138335 1304.27