Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05418 ATGAAGATATCTCTTCCTTTGGTTCTGCTTGCCATTGTGGCTATTATGGCTATGCCACTGCCACTTTCATTTGGGGTAAAAGGAAACCAACTTTCTTACAACTACTACAAGTATTCGTGTCCAAACTTGGAAAGTTTGGTTGAGAAAGAATTGATGAGCTTATTCTTGACAGATATTACTGCACCATCTTCATTTCTCAGGCTCATGTTTCATGACTGTCAAGTTCAGGGATGTGATGCATCAATTTTGTTGAACACAAACTACATTACTCGAAGCACCGAAATAACATCGTCGAGAAACTTTGGCATCAGACATAGAGAAACAATCGACGACATAAAATCGGCGTTAGAAGAAGAATGTCCGGGACAAGTATCTTGTGCAGATATCATTGTATTAGCTGCTAAGGCATCAGTTGTCCTTTCTGGAGGACCTAGTATTGAGGTTCCACTTGGAAGAAAAGATTCAACAACTTCAAGTTCTAAACAAGCTGATGCTAAGCTTCCTTCACCAACAGTATCAGTTGATGAATTTATATCCATTTTCAAATCTAAAGGAATGAGCATTCAAGAAGCTGTTGCCATTTTAGGTGCACATACACTAGGTGTTGGACACTGCTTAAACATTGTTGGCAGATTGTATAATCAACAGATAAGAGACAATATGGATTGGAGGTATAAAACCTCACTAAGACTAGCATGCCCAACAGAGATTCCTATGACAAACCTAACATTTGTGCCTAATGACATGACCCCTACAATATTTGACAATCATTATTACAGAGACATTATGATGGGGAGAGGTTTGTTTGGTATTGACTCATACATTTCTACAGATCCACGAACTGCACCCTTTGTCATGAGGTTTGCTGTGGATCAGAACTACTTCTTTGACTCCTTCAAATCTGCATTTGTTAAGCTTTCTTCTTCCAATGTTCTCACAAATATGCAGGGTGAAGTAAGAAGGAAATGCTACCAGAGAAACTAA 984 0.3872 MKISLPLVLLAIVAIMAMPLPLSFGVKGNQLSYNYYKYSCPNLESLVEKELMSLFLTDITAPSSFLRLMFHDCQVQGCDASILLNTNYITRSTEITSSRNFGIRHRETIDDIKSALEEECPGQVSCADIIVLAAKASVVLSGGPSIEVPLGRKDSTTSSSKQADAKLPSPTVSVDEFISIFKSKGMSIQEAVAILGAHTLGVGHCLNIVGRLYNQQIRDNMDWRYKTSLRLACPTEIPMTNLTFVPNDMTPTIFDNHYYRDIMMGRGLFGIDSYISTDPRTAPFVMRFAVDQNYFFDSFKSAFVKLSSSNVLTNMQGEVRRKCYQRN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05418 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Trre16g05418 327 Gene3D - 34 327 - -
Trre16g05418 327 PANTHER - 13 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 SUPERFAMILY Heme-dependent peroxidases 30 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 CDD secretory_peroxidase 30 323 IPR033905 GO:0004601|GO:0042744
Trre16g05418 327 Pfam Peroxidase 48 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 FunFam Peroxidase 168 306 - -
Trre16g05418 327 ProSiteProfiles Plant heme peroxidase family profile. 30 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g05418 327 Gene3D Peroxidase, domain 2 168 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05418 Trre-Chr16 56978351 56979980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05418 77 323 Peroxidase AT3G17070 53.968 1.66e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05418 K00430 - gmx:100806951 489.96