Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05399 ATGGCTGAGTCTGATTGGCCAAAGAAAGATAACCGTCGTTTCCTTCATGTCGTATATCGTGTTGGTGACCTTGAACGAGCCATCAAGTTTTATACTGAGAGTCTTGGGCTGAAGCTTTTGAGGCAAAGAGATGTTCCAGAGGAAAAATACGCCAATGCTTTTGTTGGATTTGGCACTGAACTATCCTATTTTGCTATTGAATTGACATATAACTATGGAGTGACTTCATATGATATTGGAGATGGCTTTGGACATTTTGGAATTGCAACTAAAGATGTTTACAAATCGGTTGAGGACATTCGGGCCAAAGGTGGAAACATCACTAGGGAGCCTGGTCCAGTTGAGGGCGGAACAACTGTTATCGCCTTTGTGAAGGATCCTGATGGTTACACTTTTGCACTCATCCAAAGATCTATAATTCATGACCCATTTATTCAAATATCTCTTCGTGTTGGTGATTTAGAACGCGACATAAAGTTTTATGAAAAGGCTTTGGGCTTCAATGTGTTGAGGAAGGTTGATAATCCTGAGAAGAAGTACACTATTGCTATACTTGGGTATGGAAAGGAGGAAGAGACAACTGTGTTGGAGTTGACATATAATTATGGTGTCACATCATACTCTAAGGGAACTGGTTATGCACAGATTGCAATTGGTACCGATGATGTATACAAGAGCGCTGAGGTAATCGACCTAGTCACAAAAGAGCTTGGAGGGAAGATTACTACGAAACCAGGGCCAGTTTCTGGCATTGGCACAAAAATTGTTGGTTTCTTAGACCCATCTGGATGGAAAACTGTGTTGGTTGACAATGAAGATTTCCTGAAGGAATTAGAGTGA 840 0.4107 MAESDWPKKDNRRFLHVVYRVGDLERAIKFYTESLGLKLLRQRDVPEEKYANAFVGFGTELSYFAIELTYNYGVTSYDIGDGFGHFGIATKDVYKSVEDIRAKGGNITREPGPVEGGTTVIAFVKDPDGYTFALIQRSIIHDPFIQISLRVGDLERDIKFYEKALGFNVLRKVDNPEKKYTIAILGYGKEEETTVLELTYNYGVTSYSKGTGYAQIAIGTDDVYKSAEVIDLVTKELGGKITTKPGPVSGIGTKIVGFLDPSGWKTVLVDNEDFLKELE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05399 279 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 12 137 IPR029068 -
Trre16g05399 279 PANTHER LACTOYLGLUTATHIONE LYASE 5 279 - -
Trre16g05399 279 ProSitePatterns Glyoxalase I signature 1. 16 37 IPR018146 GO:0004462|GO:0046872
Trre16g05399 279 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 137 IPR037523 -
Trre16g05399 279 NCBIfam lactoylglutathione lyase 14 138 IPR004361 GO:0004462|GO:0046872
Trre16g05399 279 Gene3D - 1 138 IPR029068 -
Trre16g05399 279 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 145 270 IPR029068 -
Trre16g05399 279 Gene3D - 140 279 IPR029068 -
Trre16g05399 279 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 143 271 IPR037523 -
Trre16g05399 279 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 133 IPR004360 -
Trre16g05399 279 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 265 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05399 Trre-Chr16 56857017 56859113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05399 146 270 Calmodulin-binding Proteins AT1G08110 28.667 5.06e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05399 K01759 - gmx:100793089 454.136