Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05372 ATGGATTACACCAATTCCCCCTTTCATGTTGAGGCTGCTGCTCAACGGAATCCCGCCCCTCTCCGTAAGGTTGTCGCAGTGGCTTCTATAGCCGCCGGCATACAATTTGGGTGGGCCCTACAGCTCTCCCTACTCACACCCTACATCCAGCTCCTCGGAGTACCACACAAATTGGCAGGCAACATTTGGCTATGCGGCCCGATTTCCGGCATAATCGTTCAGCCGATCGTCGGCTACTACAGTGACCGAAGTCATTCACGTTTTGGTCGCCGCCGCCCTTACATCTTCTTTGGCTCTATATCTGTTGCCATTGCTGTCTTCTTTATTGGCTATGCTGCAGATCTAGGTCACGCCTTAGGCGATGACCTAACCAAAAAGACACGTCACCGTGCTGTTGCAATCTTTACCATAGGCTTCTGGATACTAGATGTTGCCAACAATATGCTTCAAGGACCATGTCGTGCCTTCATTGGCGACCTCGCTGACGGTGATCACCATCGAATGAGTATCGGTAATTATTGGTTCTCTTTCTTCATGGCCATCGGTAATATCCTTGGTTATGCTGCTGGTTCTTATGGCAATATCCACAAAATGTTCCCTTTTACGGAAACCAAAGCATGCGATGTCTTTTGTGCCAATCTCAAAACATGTTTCTTTTTATCAATTTTCCTTCTCGCCATAGTTTCTACCTTCGCTCTACTTTATGTAGAAGACATCCCGCTACAAAAACAACCAGAAATTCAATTAGCACCCAAGGATAACCGCGGCTGCTTTAAAGAGTTGTTATATGCATTTCATGGACTGAGTAAACCGATGTGGATGTTGATGTTAGTAACCGCTATTAATTGGATAGCATGGTTCCCATTCTTCTTGTACAACACCGATTGGATGGGCCACGAAGTGTATGGTGGAAAAACGGGAGAAGACACTTATGCCGCCGGTGTACGTGCTGGAACATTGGGGCTTGGAGTGCAAGCAGGTGTGCTCGCGATAATGTCGTTGGCAGTTGAAAGGTTGAGCCGTTTTATTGGTGGAGCTAAGAGGCTGTGGGGAATTGTTAACATTATCCTTGCTATTGCACTTGCTATGACGGTTGCCATCACCAAGGCAGCGGAACATGAACGGCACGGCACTACTGGAGGGACGCCGTCTGAAGTTATTAAGGTTGCCGCATTCAGTTTCTTCGCCATCATAGGAATCCCTCTTGCGATTAATTTCAGTGTTCCATTTGCTTTAGCATCTATTTATTCCAGCACAACAGGGGGCGCCGGGCAAGGTTTATCTTTGGGAGTCCTCAATCTTGCAATTGTCATTCCACAGATTATAGTAGCGTTAGGAAGTGGACCGTGGGATGCTTTGTTTGGTGGCGGTAACTTGCCCGCGTTTATGGTGGGTGCCGTGGCAGCAGTCATCAGTGCTGTATTGGCAATCGTCCTTCTGCCTACTCCAAAGCCGGTTGATATGGCCAAGGCTTCAATTGCTCCTGGTGGTTTACATTAA 1500 0.4767 MDYTNSPFHVEAAAQRNPAPLRKVVAVASIAAGIQFGWALQLSLLTPYIQLLGVPHKLAGNIWLCGPISGIIVQPIVGYYSDRSHSRFGRRRPYIFFGSISVAIAVFFIGYAADLGHALGDDLTKKTRHRAVAIFTIGFWILDVANNMLQGPCRAFIGDLADGDHHRMSIGNYWFSFFMAIGNILGYAAGSYGNIHKMFPFTETKACDVFCANLKTCFFLSIFLLAIVSTFALLYVEDIPLQKQPEIQLAPKDNRGCFKELLYAFHGLSKPMWMLMLVTAINWIAWFPFFLYNTDWMGHEVYGGKTGEDTYAAGVRAGTLGLGVQAGVLAIMSLAVERLSRFIGGAKRLWGIVNIILAIALAMTVAITKAAEHERHGTTGGTPSEVIKVAAFSFFAIIGIPLAINFSVPFALASIYSSTTGGAGQGLSLGVLNLAIVIPQIIVALGSGPWDALFGGGNLPAFMVGAVAAVISAVLAIVLLPTPKPVDMAKASIAPGGLH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05372 499 NCBIfam sucrose/proton symporter 20 484 IPR005989 GO:0005886|GO:0008515|GO:0015770
Trre16g05372 499 SUPERFAMILY MFS general substrate transporter 22 486 IPR036259 -
Trre16g05372 499 Pfam MFS/sugar transport protein 33 236 - -
Trre16g05372 499 CDD MFS_SLC45_SUC 25 477 - -
Trre16g05372 499 PANTHER SUGAR TRANSPORTER 20 479 - -
Trre16g05372 499 Gene3D MFS general substrate transporter like domains 22 246 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05372 Trre-Chr16 56579190 56581712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05372 6 485 Sucrose Transporter Gene Family AT1G22710 59.714 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05372 K15378 - gmx:100784153 655.981