Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05299 ATGAATATGGCTTCTTCTTCTTCTCCAATATTGTTGATTATCATTTTCTCAATATTGTCCCTGCTAATTTCATGCTCTGAATCCACAGAGCATATGGTTGGAGACGATCAATTTGTTTGGAAGGTTCCTCTTTCATCACCAGATGATCTCATTCTATGGTCCTCTTCTCACAATTTCACAGTCGGCGATACTATCGTTTTTCGGTACAATACACGAAGAGAATCGGTTCGAGAAGTGATGAATGAGCATGACTTTATAAAGTGTAATACAAAGGGACCATTTGTGAGATTGGGGCACGATGGAAATACTAGAGTGGTGCTTGATAAACCAGGAATACACTATTTCATGAGTGGATGGAAGAGTCATTGCAAGAAGGGATTAAAGGTAGCTATTTTGGTCATTTCTCCCACAAATAATGAGCCTTTAGTTTCCAAGACTCCGCTAATTCGGCCGTCACTGACACTGCCTCGGCATTCGCCAAAGTCATTGTCACCGTCACCTTCACCTTCACCTTCACCTTCGCCATCTCCATCTCCATCTCCGTCACCAAATTCATCTGGTAGTAAAGGTGGTACTATTGGTTGTGGATTCATCATACTGATGGGTGTTTCATTGATGACTATGATGATGTTCTTAATTTAA 642 0.4097 MNMASSSSPILLIIIFSILSLLISCSESTEHMVGDDQFVWKVPLSSPDDLILWSSSHNFTVGDTIVFRYNTRRESVREVMNEHDFIKCNTKGPFVRLGHDGNTRVVLDKPGIHYFMSGWKSHCKKGLKVAILVISPTNNEPLVSKTPLIRPSLTLPRHSPKSLSPSPSPSPSPSPSPSPSPSPNSSGSKGGTIGCGFIILMGVSLMTMMMFLI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05299 213 MobiDBLite consensus disorder prediction 162 182 - -
Trre16g05299 213 Gene3D - 26 135 IPR008972 -
Trre16g05299 213 FunFam Cupredoxin superfamily protein 28 139 - -
Trre16g05299 213 MobiDBLite consensus disorder prediction 149 189 - -
Trre16g05299 213 CDD Phytocyanin 29 133 - -
Trre16g05299 213 SUPERFAMILY Cupredoxins 27 135 IPR008972 -
Trre16g05299 213 Pfam Plastocyanin-like domain 40 126 IPR003245 GO:0009055
Trre16g05299 213 ProSiteProfiles Phytocyanin domain profile. 29 135 IPR003245 GO:0009055
Trre16g05299 213 PANTHER BLUE COPPER PROTEIN 30 152 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05299 Trre-Chr16 56192398 56193194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05299 3 212 Phytocyanin Superfamily AT4G31840 34.597 1.28e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05299 - - tpra:123906925 265.388