Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05298 ATGGCTTCTTCTCCAATATTAATGTTGATGATAATTTTCTCAATGTGGCTTCTAATTTCCTACTCAGAATCCACAGAATATGTGGTTGGAGATAGTCAAAATTCATGGAAGGTTCCTCTTCCATCACGACATGCACTCACACAATGGGCCTCTAGTCACCAATTCGTCGACACTATCTTGTTTGATCATGATAACAAAGTGAATGAGGATGAGCATATAAAATGCAATATTGCAAAGAGTCATAGCAAGATGGGGTTAAAGCTAGGTGACGATGATGATGATGTGGTTGTCAAAAACAAGCCTCTAGTTATCCCACCTCTAATTACTCTGCCTGAGCCGCCTTCACCGGCACCGGCACCAAATTCATCCGGTAGTTATGGTGGCGCCGCTGCTGGCTGTGGACTCATCATGTGGTTGGGGGTCTCATCATTGGCTATGTTCATGTTCTTAATTTGA 456 0.4298 MASSPILMLMIIFSMWLLISYSESTEYVVGDSQNSWKVPLPSRHALTQWASSHQFVDTILFDHDNKVNEDEHIKCNIAKSHSKMGLKLGDDDDDVVVKNKPLVIPPLITLPEPPSPAPAPNSSGSYGGAAAGCGLIMWLGVSSLAMFMFLI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05298 151 SUPERFAMILY Cupredoxins 23 84 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05298 Trre-Chr16 56182541 56183270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05298 10 139 Phytocyanin Superfamily AT2G25060 25.444 2.95e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05298 - - tpra:123906926 189.504