Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05297 ATGAATATGGCTTCTTCTCCAATATTAATGTTGATGATAATTTTCTCAATGTGGCTTCTAATTTCCTACTCAGAATCCACAGAATATGTGGTTGGAGATAGTCAAAATTCATGGAAGGTTCCTCTTCCATCACGACATGCACTCACACAATGGGCCTCTAGTCACCAATTCGTCGACACTATCTTGTTTGATCATGATAACAAAGTGAATGAGGATGAGCATATAAAATGCAATATTGCAAAGAGTCATAGCAAGATGGGGTTAAAGCTAGGTGACGATGATGATGATGTGGTTGTCAAAAACAAGCCTCTAGTTATCCCACCTCTAATTACTCTGCCTGAGCCGCCTTCACCGGCACCGGCACCAAATTCATCCGGTAGTTATGGTGGCGCCGCTGCTGGCTGTGGACTCATCATGTGGTTGGGGGTCTCATCATTGGCTATGTTCATGTTCTTAATTTGA 462 0.4264 MNMASSPILMLMIIFSMWLLISYSESTEYVVGDSQNSWKVPLPSRHALTQWASSHQFVDTILFDHDNKVNEDEHIKCNIAKSHSKMGLKLGDDDDDVVVKNKPLVIPPLITLPEPPSPAPAPNSSGSYGGAAAGCGLIMWLGVSSLAMFMFLI 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05297 153 SUPERFAMILY Cupredoxins 25 86 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05297 Trre-Chr16 56182535 56183270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05297 12 141 Phytocyanin Superfamily AT2G25060 25.444 3.13e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05297 - - tpra:123906926 193.741