Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05234 ATGACTCCAAGCGATGGAGGCTTTCAGGACAGATACATTGTATCCATTGATACTAAAGGGAAGAAAGGATTTAAAGAGTATTATTTTGCTTTGGTCGTTCCAATTATACTATGCTATCTGGGATTTGGTTATCTATGTGGTAGATTGTTGAAGTCTTACAGTTCATTGCCAATCAAGAAAGAAGGGCTGCAACTTCCTTCTAGTTTTGCTGCTCGTATAGCTGAGAAATCAAATCGGAATTTGAGACTTGCCGTGTCCAACAAAAAAGTTATAATAATTAAGAATCCTGGAATTGCTGATGGACTTTTCAGAATGCATTTTCATGATTGCTTTATAAGAGGGTGTGATGCATCGGATTCTACATCATTTGATCTTGCCATTGAAGTTCTTGTTGAACTTGTGACTAAACACGAGATCTTGAAGGCATGTTAA 432 0.3704 MTPSDGGFQDRYIVSIDTKGKKGFKEYYFALVVPIILCYLGFGYLCGRLLKSYSSLPIKKEGLQLPSSFAARIAEKSNRNLRLAVSNKKVIIIKNPGIADGLFRMHFHDCFIRGCDASDSTSFDLAIEVLVELVTKHEILKAC 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05234 143 Gene3D - 78 126 - -
Trre16g05234 143 ProSiteProfiles Plant heme peroxidase family profile. 64 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g05234 143 SUPERFAMILY Heme-dependent peroxidases 86 131 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05234 Trre-Chr16 55737929 55740227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05234 1 95 Core DNA Replication Machinery Family AT5G27740 34.965 2.25e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05234 K00430 - oeu:111377418 60.8474