Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05221 ATGGACAGTAAATCAATGCTAGAAACTAATCTCAATCCAGTTATTTTGCAGAGTGAGGGCTTACTCAAGATTATAGCCATAGATCCTGACAGAAAATCCTATGAGATGGGACTCCCATTCATAAAAAAGGCTGGTGTTTTACACAAGATTGACTATATAGAGTCTCTAGCTTTGCCAGTTCTTGATAAACTCCTACAAGATCCTGCAAATGAAGGGGCTTTTGATTTTGCATTTGTTGATGCTGACAAAAATAACTACTTGAATTACCATGAGAGGCTTTATCAAGTTAGTTAA 294 0.3639 MDSKSMLETNLNPVILQSEGLLKIIAIDPDRKSYEMGLPFIKKAGVLHKIDYIESLALPVLDKLLQDPANEGAFDFAFVDADKNNYLNYHERLYQVS 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05221 97 PANTHER O-METHYLTRANSFERASE-RELATED 23 95 - -
Trre16g05221 97 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 93 IPR029063 -
Trre16g05221 97 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 97 IPR002935 GO:0008171
Trre16g05221 97 Pfam O-methyltransferase 23 94 IPR002935 GO:0008171
Trre16g05221 97 Gene3D Vaccinia Virus protein VP39 9 97 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05221 Trre-Chr16 55613824 55614333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05221 23 96 Monolignol Biosynthesis Gene Families AT4G26220 70.270 1.86e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05221 K00588 - gmx:100795229 127.872