Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05215 ATGGTGCTTCTTTCTTCGTTCTGTTCCTTTCTTCCAATTCACTCTTCTTGTTCTTCAACGTTTCCAAATTATGCATTAACATATTCAAATTGCAACTCAATCTCCAACCTCAGAACTCAAATCCAATCCTCTGCTTCTTCCACAAACATTTGCACCCAAAAAATCGACACCTCTTTGATCACCATAGCTGAATCTTTCTACGATGATGAGCTTTGGGCTGCTTCCTCCCTCCGCGTTCGTTCCTTCAACGAATTCCGTCCTGACACTTTCGGAGTCCAAGATCATGCGAAGTACTTGGCTGAGCGTGAGTTTGAAGCACTTAAGGAGCGTATTTCAGGGAAAAAGTTGGGTTTTAAAAGAGTTTCTTGCATAAATGCTTCACTTCCTTTGTCTCATTTATCCGGCCTCTATGATGATTTATGTTCTTCATGTAAGTTTTCTGCCAATGGAGAAGACAGGATTGTAGTTGGCTCTCTTGATCTTAATCAGTGCTTGAGTCTTTCTGATGAAATTGTAGGGATGAAGCCAGAGGTCAGCGCCAGCGGAGCTGATACTACAAGGGCATACCTCAGTAATGTATGTGTTGCGAGAGAGTTGCATAGAAATGGGTTGGCCTATGAACTTCTTGAAAAGTCGAAGTTAGTTGCTCGTAATTGGGGCATAACAGATTTGTACGTCCATGTTGCCGTTGACAACGAACCAGCAAAGAAATTGTACATGAAGAGTGGGTTTGTCTATGAGAGTGATGAACCTGCGTGGCAGGCCAGGTTTCTTGATCGACCGCGAAGACTTCTGCTATGGATGGGACTTTCAATCACCTAA 822 0.4307 MVLLSSFCSFLPIHSSCSSTFPNYALTYSNCNSISNLRTQIQSSASSTNICTQKIDTSLITIAESFYDDELWAASSLRVRSFNEFRPDTFGVQDHAKYLAEREFEALKERISGKKLGFKRVSCINASLPLSHLSGLYDDLCSSCKFSANGEDRIVVGSLDLNQCLSLSDEIVGMKPEVSASGADTTRAYLSNVCVARELHRNGLAYELLEKSKLVARNWGITDLYVHVAVDNEPAKKLYMKSGFVYESDEPAWQARFLDRPRRLLLWMGLSIT 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05215 273 PANTHER OS08G0260000 PROTEIN 27 271 - -
Trre16g05215 273 Gene3D - 145 249 - -
Trre16g05215 273 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 77 273 IPR000182 GO:0016747
Trre16g05215 273 FunFam uncharacterized protein LOC106768637 131 260 - -
Trre16g05215 273 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 182 255 IPR016181 -
Trre16g05215 273 CDD NAT_SF 169 227 - -
Trre16g05215 273 Pfam Acetyltransferase (GNAT) family 169 244 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05215 Trre-Chr16 55596789 55598879 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre16g05215 Acetyltransf_1 6e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05215 - - gmx:100802268 419.083