Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05207 ATGCTTTCTAGATCTTGTTTAGGTTTACTTAATCATCAACTATCACTAAACAACGATGATGATTACCAAAACATAAACACCGTTCAACAACTCATCACAACGTTAAACGAAGAACAATATTCAAACAACGTTGTTTCAGTTTCAGTTCCTTCATCACCAATTCCTCGTAAACAAAGAATGATTATAGTATCAAACCAGTTACCAATACGCGTCGTTTCATCTTCTTTCAACGACGAAAACAACAACACCTTCAAATTTGAATGGGATGTTGATAGCATAACGTTTCAGCTCAAAGAAGGTTTATCTTCTGATTCTCAAGTGTTTTACGTTGGTTCTTTGAAAACACAGATTGAAATTGAACCATCACAACAAGAAGAAATTGCGAAGATTTTGTTAAATGAGTTTCGTTGTGTTCCAACTTTTTTACCTACAGAGATTCACAGTGGTTTCTACCATGGTTTCTGTAAGCATTATCTTTGGCCTCTGTTTCACTATATGCTTCCTGTTACAAAGAGTCAAGGTGCACGTTTTGATGATTCTCAGTGGCGTGCTTATGTTACTGCGAATAGAATCTTTGCCGACAAGGTACGAGAAGTTCTTAACGCTGACGAGGATTATGTTTGGATTCATGATTATCATCTTATGATTTTGCCAACTTATTTGAGGAAACGTTTTCCTAAAGTGAAATTGGGTTTTTTTCTTCATAGTACGTTTCCTACTTCGGAAATTTATAGAACAATACCGGTTCGTGAGGATATTTTGAGGGGTTTGTTGAATTGTGATTTAATTGGGTTTCATACTTTTGATTATGCAAGACATTTTTTGTCTTGTTGTAGTAGAATGTTGGGTTTGGATTATGAGTCTAAAAGAGGTTACATTGGACTTGATTACTTTGGTAGAAATGTTACAATCAAGATTCTTCCTGTGGGGATTCATATGGGTCTTCTCGAATCGGTTTTGTCGTTGTCTGTTACAGCTAAGAGGGTGAAGGAGTTGAAGGAAGAGTATAAAGGGAAAGATGTGATTTTGGGGGTTGATGATATGGATTTGTTTAAAGGTATTGGGTTGAAGTTTTTGGCATTGGGGAAGCTTTTGGAGGATAATGAAAAATTAAGGGGTCAAGTTGTGTTGGTTCAGATTCTGAATCAAGCGAGGAGTAGCGGAAAAGATATTCAGGATTTGAAGTTTGAGATTGAAGCGATTGCTAAGGAGGTTAATGATGAATATGGTGATGAACAATCTGGGTACAGGCCTATTGTTTGTATATATGGTCCGGTTTCGACTCAGGAGAAGGTTGCATACTATGCTATATCGGAATGTTGTATTGTGAATGCTGTGAGAGATGGGATGAATTTGATGCCTTATGAGTATACTGTTTGCAGACAAGGAAGTGCTAAATTGGACAAAGCACTTGAGGTGGAAAAAGATGATGATAAAAAGAGTGTTATTATTGTTTCTGAGTTCATTGGTTGTTCGCCTTCGCTCAGCGGTGCAATTCGGGTGAATCCGTGGAACATTGACGATGTTTCTGAGAAAATGAACTCTGCAATCAAAATGCCGGATTCTGAGAAGCAATTGCGGCACAAGAAGAATTATAAGTATATAAGCTCTCATGATGTAGCGTATTGGGCTAAGAGTTTTGATCAGGATTTAGAGAGAGCTTGTAGGGAGCATTATCTCAAGATATATGTTGGATTAGGACTTGATCATTTTAGAGTCATTGCTTTGGATCCTAGTTTTAAGAAGCTTTGTCTTGATGACATTGTCCCTGCTTACAGAGATACAAAGAGTAGATTGATCCTTTTGGATTATGACGGCACCATGATGCCTCAGGGATCAACAAACAAAGCTCCAAGTTCTGTTGTTATCAATCTCTTGAATTCCTTATGCAGCGATCCCAAAAATAAAGTGTTCATTGTTAGTGGCAGGGGTAGAGTTTGCCTTAGCGACTGGTTTTCTCCGTGTGACAAATTGGGTCTCTCTGCAGAACATGGTTACTTCACTAGGTGGAGTAAGGATTCTCTTTGGACGACTTGCGGATTGGCATCAGATTTTGATTGGAAAATTAATGTAGAAAAGGTGATGTCCCTTTATACAGAAGCAACTGATGGTTCCTTCATTGAAGAAAAGGAAAGTGCAATGGTTTGGCAACATCAAGAAGCAGATCCTGATTTTGGACTGTGGCAAGCTAAAGAGCTTCTTGTTCATCTTGAGAGTATGCTGGCCAATGATCCTGTAGTAGTTAAAAGGGGACAGCATATTGTTGAAGTAAAGCCGCAGGGTGTGAGCAAAGGTAAAGTAGTGGAAGAGCTTATATCAACCATGAGGAATGAAGGAAATTCACCAGATTTTCTGCTATGCATAGGAGATGATAGATCAGATGAAGATATGTTTGAAAGCATTGCTAATTTAGCTTTATCAACCATATCACAAGTTTTTGCATGCACTATTGGTTTTAAACCAAGCAGAGCTAAATACTATTTGGATGATACCGGTCATGTTATCAATCTGCTCGAAGGACTTGCCGCTACATCAGCAGCAGATTAG 2547 0.382 MLSRSCLGLLNHQLSLNNDDDYQNINTVQQLITTLNEEQYSNNVVSVSVPSSPIPRKQRMIIVSNQLPIRVVSSSFNDENNNTFKFEWDVDSITFQLKEGLSSDSQVFYVGSLKTQIEIEPSQQEEIAKILLNEFRCVPTFLPTEIHSGFYHGFCKHYLWPLFHYMLPVTKSQGARFDDSQWRAYVTANRIFADKVREVLNADEDYVWIHDYHLMILPTYLRKRFPKVKLGFFLHSTFPTSEIYRTIPVREDILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYFGRNVTIKILPVGIHMGLLESVLSLSVTAKRVKELKEEYKGKDVILGVDDMDLFKGIGLKFLALGKLLEDNEKLRGQVVLVQILNQARSSGKDIQDLKFEIEAIAKEVNDEYGDEQSGYRPIVCIYGPVSTQEKVAYYAISECCIVNAVRDGMNLMPYEYTVCRQGSAKLDKALEVEKDDDKKSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSEKMNSAIKMPDSEKQLRHKKNYKYISSHDVAYWAKSFDQDLERACREHYLKIYVGLGLDHFRVIALDPSFKKLCLDDIVPAYRDTKSRLILLDYDGTMMPQGSTNKAPSSVVINLLNSLCSDPKNKVFIVSGRGRVCLSDWFSPCDKLGLSAEHGYFTRWSKDSLWTTCGLASDFDWKINVEKVMSLYTEATDGSFIEEKESAMVWQHQEADPDFGLWQAKELLVHLESMLANDPVVVKRGQHIVEVKPQGVSKGKVVEELISTMRNEGNSPDFLLCIGDDRSDEDMFESIANLALSTISQVFACTIGFKPSRAKYYLDDTGHVINLLEGLAATSAAD 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05207 848 FunFam Trehalose-6-phosphate synthase 8 54 318 - -
Trre16g05207 848 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 727 848 - -
Trre16g05207 848 Gene3D Glycogen Phosphorylase B; 326 537 - -
Trre16g05207 848 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 43 842 IPR001830 GO:0003824|GO:0005992
Trre16g05207 848 NCBIfam HAD-IIB family hydrolase 599 800 IPR006379 -
Trre16g05207 848 Gene3D - 597 714 IPR023214 -
Trre16g05207 848 Gene3D - 728 848 IPR023214 -
Trre16g05207 848 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 58 556 - -
Trre16g05207 848 CDD HAD_TPP 599 831 - -
Trre16g05207 848 CDD GT20_TPS 59 552 IPR001830 GO:0003824|GO:0005992
Trre16g05207 848 Gene3D Glycogen Phosphorylase B; 49 325 - -
Trre16g05207 848 SUPERFAMILY HAD-like 598 842 IPR036412 -
Trre16g05207 848 Pfam Trehalose-phosphatase 601 830 IPR003337 GO:0003824|GO:0005992
Trre16g05207 848 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 597 714 - -
Trre16g05207 848 FunFam Alpha,alpha-trehalose-phosphate synthase 319 536 - -
Trre16g05207 848 Pfam Glycosyltransferase family 20 59 552 IPR001830 GO:0003824|GO:0005992
Trre16g05207 848 NCBIfam trehalose-phosphatase 596 841 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05207 Trre-Chr16 55502036 55505085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05207 13 845 Trehalose Biosynthesis Gene Families AT2G18700 63.895 0.0 1101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05207 K16055 - gmx:100810498 1231.47