Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05193 ATGGCCGCATACAGAGAACCCATGAGTGTACACGAAAGAGCACCAATCTCATCACAAACACCACACTCACCATGGCATTCACCAGTTCCTTACTTATTCGGTGGTTTAGCAGCCATGTTAGGACTAATAGCTTTTGCTCTTTTAATCCTTGCATGTTCTTATTGGAAACTTTCAGGTTACCTTGAAGGTAACAGTGAATCAGAAAGAGACCTTGAAGCTGGACAAGAAAACAACAACGAAACAGATCAGAAACCACAGAAACCTTATGAAGAAAAAATCTTGGTTATTATGGCTGGACAAAATAAACCAACATTCTTAGCCACACCAAGCATGTCTTCTTCAAGTGCAAGTACTAGTAGATCCTCTTCTTTTGGTGATAACACTAGTACATGTACTTGTGAACAGAATCATAAATCCATAGAAAACAAGAATGATGATGATGATGATGATGATTCAACCGTGAAACAGGAAAGCGGTGGTGAAAATCATGTAAGAACAACAGAGAGTACTGTAGAAACAACGACAACAACAGCAACAACAATAACAACAACAGAAACATCTTCAGATTAA 570 0.3842 MAAYREPMSVHERAPISSQTPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNSESERDLEAGQENNNETDQKPQKPYEEKILVIMAGQNKPTFLATPSMSSSSASTSRSSSFGDNTSTCTCEQNHKSIENKNDDDDDDDSTVKQESGGENHVRTTESTVETTTTTATTITTTETSSD 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05193 189 MobiDBLite consensus disorder prediction 105 137 - -
Trre16g05193 189 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 5 152 IPR040359 GO:0080143
Trre16g05193 189 MobiDBLite consensus disorder prediction 105 189 - -
Trre16g05193 189 MobiDBLite consensus disorder prediction 68 88 - -
Trre16g05193 189 Coils Coil 64 84 - -
Trre16g05193 189 MobiDBLite consensus disorder prediction 163 189 - -
Trre16g05193 189 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05193 Trre-Chr16 55355915 55356484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05193 21 116 Glutamine Dumper (GDU) Family AT5G57685 68.367 1.28e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05193 - - psat:127138517 241.121