Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05157 ATGGTGATTCCTGTTGCGTCTCATAATAAGGATTTTCAAGCCAAGATTCATAGAATAGTCACAAACGTTGGTTTTTCAAACTCAATCTACAAGGCTACTCTCATCCATCAAAATCCGAAAATCAAGATAGAAGTTCAACCAAAACTTCTCAAATTCAGATCATTACATGAGAAACAATCATTTGTTGTCACTATTATTGGGAGAGAAATATTAAATCAAACTGTGATTTTCTCCTCACTCATTTGGTTTGATGGCACCCACAAAGTCAAAAGTCCCATTATTGTTATGAAAAACTAA 297 0.3367 MVIPVASHNKDFQAKIHRIVTNVGFSNSIYKATLIHQNPKIKIEVQPKLLKFRSLHEKQSFVVTIIGREILNQTVIFSSLIWFDGTHKVKSPIIVMKN 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05157 98 Pfam Fibronectin type-III domain 7 95 IPR041469 -
Trre16g05157 98 Gene3D - 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05157 Trre-Chr16 55085487 55085783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05157 1 95 Subtilisin-like Serine Gene Family AT5G58830 40.625 3.42e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05157 - - mtr:11439741 117.087