Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05105 ATGTCATCATCATCATCAAAAGTAACATTGAAAAGTTGTTACTCTGTGAGACCAATGGAACCAACATGGTGTGGTCGATTACCATTATCCGAATGGGATCAAATTGGAATCATAACACACGTTCCAACAATTTACTTTTATCACCCCCCACAAAACTGGCTCACCCCCTCTACTAAAATCGCCACCACTTTGAAAACCTCACTAAGCAAAGCCCTAGTGCCGTTTTATCCACTAGCCGGTCGTTTACAATGGAAAGAAAACGGTCGTTTTGATATCGAATGCAATGCATTAGGTGTTCAATTCATCGAAGCACAATCCTCGTTAAAATTATCCGAACTAGGTGACTTTTCACCTACTTCTGAATATTACCCTTATCTTATTCCTCATGTTGATTACACACTCCCAATTCAAGATATTCCTCTAGTTATGGTGCAACTCACACATTTCAAATGTGGTGGTATTAGCATTAGTTTGTTAGTCTCACACGCCGTTGCTGATGGACAAAGTTCATTGCATTTCTCTAATGAGTGGGCACGGCTCGCACGAGGCGAGCCTTTGAAAATGACGCCATTTCTTGATAGAAACGTGTTGCCATCGTCAAACAATTGTAACGACGTTGTTAATGAAAGTGAATTTAATCAACAACCTCCGTTGTTGTTAGGAAATTCGGATAATTTTGAAGAAAGGAAGAAAAAAACAACTGTGGCTATACTTAAAGTGAGTAAAACACAAGTTGAAAAGTTGAAAAAAACAGCCAATGAGAGTTGGGAGAAACCTAGTAATGGTCGGGGTTATACGAGGTATGAAACATTAACCGGTCATATTTGGAGAAGTGCATGTAAAGCTAGAGGGCATGGAAATGACCAACCAACCGGGCTTGGTGTTTGTGTTGATTGGAGGAGTCGCGTCGAACCTAATTTACCAAAAGGGTATTTTGGGAATGCAACTTTGGATGTTGTGGCTACTAGTCTTGCAGGTGATCTAATGTCTAAGCCTTTAGGGTATGCTTCAAGTAGGATAAGGGAAGCTATTGAAAAAGTGAATGATGAATATGTTAGGAAGTGGTTTGAGTATTATAAGAAACAAGAAGATTTTACTAAGTTTCAAGATCTTCGTGAGATGTTAGGGAGTGATGAAAAAGGACCATTTTATGGGAATCCTAATTTAGGTGTTGTTAGTTGGTTAACATTGCCAATTTATGGACTTGATTTTGGATGGGGGAAAGAGGTTTATATGGGGCCAGGAACACATGATATGGATGGTGATTCTCTGCTTCTTCCTAGTCATGATGATGATGGATTGTTGGTTGCTATTTGTTTGCAAGAGGTTCATGTGGATGCCTTCAAGAGGCATTTTTATCAAGACATTGTAATCAAACAACAATGTCTAAATTCAAAGAACAAACAACAATGTCGTCATTCATGGATTGTTAAAAAGGGCAATTGTTTGCTAGATTGA 1458 0.3889 MSSSSSKVTLKSCYSVRPMEPTWCGRLPLSEWDQIGIITHVPTIYFYHPPQNWLTPSTKIATTLKTSLSKALVPFYPLAGRLQWKENGRFDIECNALGVQFIEAQSSLKLSELGDFSPTSEYYPYLIPHVDYTLPIQDIPLVMVQLTHFKCGGISISLLVSHAVADGQSSLHFSNEWARLARGEPLKMTPFLDRNVLPSSNNCNDVVNESEFNQQPPLLLGNSDNFEERKKKTTVAILKVSKTQVEKLKKTANESWEKPSNGRGYTRYETLTGHIWRSACKARGHGNDQPTGLGVCVDWRSRVEPNLPKGYFGNATLDVVATSLAGDLMSKPLGYASSRIREAIEKVNDEYVRKWFEYYKKQEDFTKFQDLREMLGSDEKGPFYGNPNLGVVSWLTLPIYGLDFGWGKEVYMGPGTHDMDGDSLLLPSHDDDGLLVAICLQEVHVDAFKRHFYQDIVIKQQCLNSKNKQQCRHSWIVKKGNCLLD 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05105 485 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 450 - -
Trre16g05105 485 Gene3D - 2 214 IPR023213 -
Trre16g05105 485 Gene3D - 222 455 IPR023213 -
Trre16g05105 485 Pfam Transferase family 7 454 - -
Trre16g05105 485 FunFam Tryptamine hydroxycinnamoyl transferase 221 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05105 Trre-Chr16 54671531 54674371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05105 7 454 Monolignol Biosynthesis Gene Families AT5G48930 38.803 1.81e-105 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05105 K13065 - gmx:100777007 616.69