Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g05095 ATGGGCAAACCATCGAATTTAAATACTCCGTCGATCACAATTTCCCATCTCGTGCGAACTCAAGTTGTCCACCGTACGGTCACCAATGTCGCCATGGAAGAAACCTATGTGATCACAGGCAGAGTGGGATCAGCAGTTGCTTTTGAAGTCAACCCTCCTTCAATGATTGTCAATGCAGGCGTCTCATATCGTTCACGTCTCACTCTGAGGATTCCTGTTGTGGCCAAAAGATTGCCGCAATAG 243 0.4733 MGKPSNLNTPSITISHLVRTQVVHRTVTNVAMEETYVITGRVGSAVAFEVNPPSMIVNAGVSYRSRLTLRIPVVAKRLPQ 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g05095 80 Gene3D - 1 76 - -
Trre16g05095 80 Pfam Fibronectin type-III domain 6 59 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g05095 Trre-Chr16 54545483 54545725 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g05095 1 71 Subtilisin-like Serine Gene Family AT4G30020 61.111 5.51e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g05095 - - tpra:123910073 103.605