Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g04924 | ATGGGAAGAGAAGCACCAAAGCCGCAACAACAACAAGGACAAGGAACTGCTTACACTGTTGAGCAGCTCGTTGCATTGAATCCCTACAATCCTGATATTCTTCCAGATCTCGAAAACTATGTCAATGATCAGGTTTCATCAGAGACATATAGTCTCGAATCAAATCTCTGCCTCCTTCGTCTCTACCAGTTTGAGCCTGAGAAAATGAGTTCTCAGATTGTAGCTCGCATATTGGTTAAGGCCCTCATGGCTATGCCGGCTCCGGACTTCAGCCTGTGTCTCTTTTTGATTCCGGAACGTGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTGCTATCTCACTATTTGGAGACTGGAAGGTTTCGTCAGTTCTGGGACGAAGCTGCAAAAAGTCGTCATATAGTTGAAGCTGTGCCTGGATTTGAGCAGGCAATCCAAGGCTATGCAATTCATGTCCTATCCTTGACTTACCAAAAGATTCCCAGAACTGTGCTTGCTGAGGCTATCAACATAGAAGGTTTAGCCTTGGACAAATTCCTTGAACACCAAGTAGCCAACTCTGGTTGGGTTATTGAGAAAAGCCAGGGCAGGGGTCAACTCATTGTCCTTCCCAGAGATGAATTTAATGATCCAATTTTGAAGAAAAACACTGCAGATAGTGTACCATTCGAGCACGTTACTCACCTCTTATCTATTCTCAGTTGA | 708 | 0.4449 | MGREAPKPQQQQGQGTAYTVEQLVALNPYNPDILPDLENYVNDQVSSETYSLESNLCLLRLYQFEPEKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINIEGLALDKFLEHQVANSGWVIEKSQGRGQLIVLPRDEFNDPILKKNTADSVPFEHVTHLLSILS | 235 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g04924 | 235 | Gene3D | ARM repeat; domain 1 | 14 | 128 | IPR016020 | GO:0003743|GO:0005852|GO:0006446|GO:0043022 | |
Trre16g04924 | 235 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 | 8 | 232 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Trre16g04924 | 235 | FunFam | Eukaryotic translation initiation factor 3 subunit K | 10 | 128 | - | - | |
Trre16g04924 | 235 | Gene3D | - | 131 | 234 | IPR036388 | - | |
Trre16g04924 | 235 | FunFam | Eukaryotic translation initiation factor 3 subunit K | 131 | 234 | - | - | |
Trre16g04924 | 235 | Pfam | CSN8/PSMD8/EIF3K family | 70 | 196 | IPR033464 | - | |
Trre16g04924 | 235 | SUPERFAMILY | "Winged helix" DNA-binding domain | 140 | 232 | IPR036390 | - | |
Trre16g04924 | 235 | SUPERFAMILY | ARM repeat | 16 | 137 | IPR016024 | - | |
Trre16g04924 | 235 | Hamap | Eukaryotic translation initiation factor 3 subunit K [EIF3K]. | 11 | 235 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Trre16g04924 | 235 | ProSiteProfiles | PCI domain profile. | 50 | 209 | IPR000717 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g04924 | Trre-Chr16 | 53108344 | 53110384 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g04924 | 1 | 235 | Eukaryotic Initiation Factors Gene Family | AT4G33250 | 72.766 | 9.02e-127 | 356 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre16g04924 | K15028 | - | gmx:100306445 | 409.838 |