Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04900 ATGAACACCAAGGGATTGGTTGAGCTCATTGTTCTCAATATCGGAAAGGATCGCAAGGTGCTAAATGACCAATCCTTTGCAATTTGTGTTCTTATGGCATTATTCACAACATTCATCACCACACCAATAGTGATGGCAGTATACAAACCAGCTAGAAGAGGAGCACCTTACAAGCACAAAACAATCCAACGTAAAGATAACGAATCAGAGCTACGAGTCTTGGCATGTTTCCACAGCACACGCAACATCCCTACACTAATCAACCTTGTAGAATCATCCCGAGGAACACGAAAGCGAGGAAAACTCTGTATCTATGCAATGCATTTGATGGAACTCTCAGAAAGATCTTCAGCTATCACTATGGTTCACAAGGCACGTAACAATGGCATGCCATTTTGGAACACGAAACAAAATGATGAAGATCGAATGGTAATTGCATTCCAAACCTATGGAAAATTAAGTAGTGTCAATGTTCGTCCCATGACAGCAATTTCTGCTCTCAACAACATCCATGAAGATATTTGTACTAGTGCTCACCAAAAGCGCGCCGCAATAATAATCCTTCCGTTCCATAAACATCAACGTATGGACGGAACAATGGAGTCATTAGGACATTCATTCCATCTAATCAATGAGCTTGTGTTGAGTCATGCACCATGTTCTGTTGGAATTTTGGTTGATCGCGGTCTCGGTGGAACAAGCCAAGTACAAGCTAGTGAGGTTTCATTTCATGTTGTTGTAGTCTATTTTGGAGGGCGCGACGATAACGAAGCACTTGCTTATGGTTTGAGAATAGCAGAACATCCTGGGATTCTGCTAACTGTTGTTAAATTTGTTCCTCCACCTGGAATGACATTATCTTTCGGTGCTAAATTGGTCGGTGTTGCATCAGATAAGAACATAAAAGTAGCGATCGATGACATCGATGGTAGTAGCCATGATGGTAACCAAGATGAACAATTGTGGAATGAGTTTCATAATGCAAAGAGTATGAATGAAGAATCAGTTAAGTATGAGGAAAAGTTGGTTGAAAGTAAAAATGATATTGAAGCAGCATTGAAGGAATTAAGTAGAAGCAATTTGATATTGGTTGGTAGAATGCCATCAGTTGCACCTTTGGTTGGTAAAAGTGATTCTCCTGAGCTTGGACCTATTGGAAGTTATATGGCTTCTTCTAGTTTCTCCAATTCTGCATCAGTTTTGGTCATTCAACAATATAATTCTACACTTGATATTCATCCTTTGGTTATGGAGGAATTTGATTGTCCTGAAGCACCAGATACACCAAGGTTTAATTAA 1299 0.398 MNTKGLVELIVLNIGKDRKVLNDQSFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRKDNESELRVLACFHSTRNIPTLINLVESSRGTRKRGKLCIYAMHLMELSERSSAITMVHKARNNGMPFWNTKQNDEDRMVIAFQTYGKLSSVNVRPMTAISALNNIHEDICTSAHQKRAAIIILPFHKHQRMDGTMESLGHSFHLINELVLSHAPCSVGILVDRGLGGTSQVQASEVSFHVVVVYFGGRDDNEALAYGLRIAEHPGILLTVVKFVPPPGMTLSFGAKLVGVASDKNIKVAIDDIDGSSHDGNQDEQLWNEFHNAKSMNEESVKYEEKLVESKNDIEAALKELSRSNLILVGRMPSVAPLVGKSDSPELGPIGSYMASSSFSNSASVLVIQQYNSTLDIHPLVMEEFDCPEAPDTPRFN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04900 432 Gene3D - 1 55 IPR038770 -
Trre16g04900 432 PANTHER CATION/H + ANTIPORTER 1 408 - -
Trre16g04900 432 Coils Coil 328 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04900 Trre-Chr16 52876344 52878016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04900 1 421 Antiporter Super Family AT3G17630 64.303 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04900 K26731 - gmx:100815966 673.7