Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04899 ATGCGATCAATCCAAAGAACCGGTAGAAAAGCCTTAGCGATTGCCCTTTGTGGAATCACAGTCCCATTTGTTCTTGGCATAGGAACATCTGTTGTCCTTAGAGCCACAATTTCCAAAGGAGCAGAACCTGTCCCTTTTCTTGTCTTCATGGGAGTTGCTCTCTCGATTACTGCATTTCCTGTCCTTGCTCGAATTCTAGCTGAACTCAAACTCCTCACCACAGATGTCGGTCGCATAGCTATGTCAGCTGCTGCTGTCAATGATGTTGCAGCTTGGATACTTCTTGCTCTAGCTATAGCCTTATCCGGAGATGATACGTCACCTTTGATTTCTCTTTGGGTTATGCTCTCCGGTACTGCTTTTATTCTCTTTGCTGTATTCGCTATAAGACCGTTGCTTGCATACATGGCTAAGCGTTCCCCCGAGGGTGAACCTGTGAGAGAGCTTTACATTTGTATCACACTGACAATGGTTTTGGCTTGTAGTTTTGTTACTGACACTATTGGAATTCATGCACTATTTGGTGCTTTTGTTGTTGGTATAATTATGCCTAAAGATGGTCCTTTTGCTGGTGTTTTGATTGAAAAGATTGAAGATCTTGTTTCTGGTCTCTTTTTGCCACTCTATTTTGCTTCTAGTGGTTTGAAAACAAATGTGGCTACTATTAGTGGAGGACTTTCTTGGGCACTATTAGCACTTGTTATATTCAATGCTTGCTTTGGAAAGATTATTGGTACTGTCACAGTATCAATGCTATGCAAAATGCCTTTTAGAGAAGCCCTTGCACTTGGATTTATCATGAACACCAAGGGATTGGTTGAGCTCATTGTTCTCAATATCGGAAAGGATCGCAAGGTGCTAAATGACCAATCCTTTGCAATTTGTGTTCTTATGGCATTATTCACAACATTCATCACCACACCAATAGTGATGGCAGTATACAAACCAGCTAGAAGAGGAGCACCTTACAAGCACAAAACAATCCAACGTAAAGATAACGAATCAGAGCTACGAGTCTTGGCATGTTTCCACAGCACACGCAACATCCCTACACTAATCAACCTTGTAGAATCATCCCGAGGAACACGAAAGCGAGGAAAACTCTGTATCTATGCAATGCATTTGATGGAACTCTCAGAAAGATCTTCAGCTATCACTATGGTTCACAAGGCACGTAACAATGGCATGCCATTTTGGAACACGAAACAAAATGATGAAGATCGAATGGTAATTGCATTCCAAACCTATGGAAAATTAAGTAGTGTCAATGTTCGTCCCATGACAGCAATTTCTGCTCTCAACAACATCCATGAAGATATTTGTACTAGTGCTCACCAAAAGCGCGCCGCAATAATAATCCTTCCGTTCCATAAACATCAACGTATGGACGGAACAATGGAGTCATTAGGACATTCATTCCATCTAATCAATGAGCTTGTGTTGAGTCATGCACCATGTTCTGTTGGAATTTTGGTTGATCGCGGTCTCGGTGGAACAAGCCAAGTACAAGCTAGTGAGGTTTCATTTCATGTTGTTGTAGTCTATTTTGGAGGGCGCGACGATAACGAAGCACTTGCTTATGGTTTGAGAATAGCAGAACATCCTGGGATTCTGCTAACTGTTGTTAAATTTGTTCCTCCACCTGGAATGACATTATCTTTCGGTGCTAAATTGGTCGGTGTTGCATCAGATAAGAACATAAAAGTAGCGATCGATGACATCGATGGTAGTAGCCATGATGGTAACCAAGATGAACAATTGTGGAATGAGTTTCATAATGCAAAGAGTATGAATGAAGAATCAGTTAAGTATGAGGAAAAGTTGGTTGAAAGTAAAAATGATATTGAAGCAGCATTGAAGGAATTAAGTAGAAGCAATTTGATATTGGTTGGTAGAATGCCATCAGTTGCACCTTTGGTTGGTAAAAGTGATTCTCCTGAGCTTGGACCTATTGGAAGTTATATGGCTTCTTCTAGTTTCTCCAATTCTGCATCAGTTTTGGTCATTCAACAATATAATTCTACACTTGATATTCATCCTTTGGTTATGGAGGAATTTGATTGTCCTGAAGCACCAGATACACCAAGGTTTAATTAA 2097 0.4058 MRSIQRTGRKALAIALCGITVPFVLGIGTSVVLRATISKGAEPVPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGDDTSPLISLWVMLSGTAFILFAVFAIRPLLAYMAKRSPEGEPVRELYICITLTMVLACSFVTDTIGIHALFGAFVVGIIMPKDGPFAGVLIEKIEDLVSGLFLPLYFASSGLKTNVATISGGLSWALLALVIFNACFGKIIGTVTVSMLCKMPFREALALGFIMNTKGLVELIVLNIGKDRKVLNDQSFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRKDNESELRVLACFHSTRNIPTLINLVESSRGTRKRGKLCIYAMHLMELSERSSAITMVHKARNNGMPFWNTKQNDEDRMVIAFQTYGKLSSVNVRPMTAISALNNIHEDICTSAHQKRAAIIILPFHKHQRMDGTMESLGHSFHLINELVLSHAPCSVGILVDRGLGGTSQVQASEVSFHVVVVYFGGRDDNEALAYGLRIAEHPGILLTVVKFVPPPGMTLSFGAKLVGVASDKNIKVAIDDIDGSSHDGNQDEQLWNEFHNAKSMNEESVKYEEKLVESKNDIEAALKELSRSNLILVGRMPSVAPLVGKSDSPELGPIGSYMASSSFSNSASVLVIQQYNSTLDIHPLVMEEFDCPEAPDTPRFN 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04899 698 PANTHER CATION/H + ANTIPORTER 2 674 - -
Trre16g04899 698 Coils Coil 594 621 - -
Trre16g04899 698 Gene3D - 1 321 IPR038770 -
Trre16g04899 698 Pfam Sodium/hydrogen exchanger family 1 309 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04899 Trre-Chr16 52875546 52878016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04899 3 687 Antiporter Super Family AT3G17630 68.413 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04899 K26731 - gmx:100815966 1099.35