Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04810 ATGGTTCATTACAACTTCTCTGTTTTTTCTGTCCTACCTATCTACACCAAACTCATCAAGGGTGGCCTTAAGATATGGATTTATAGTGGAGATGCAGATGGTAGAGTACCTGTGATAGGGACACGATATTGTGTTGAGGCTTTTGGATTACCTCTAAAGTCTACTTGGAGGACTTGGTACCATCATAATCAGGTTGGAGGAAGGCGCTCTCTCTTATTCATTCATTCCTCACTGGACACCATCTCCCTACCACACGTTCGTGATCATCATGCATTCTTCATTTTCATATTTATCATTGTCAAAACATTAAATCTATATGCTTGTTTGTTTCTTAACAAATAG 342 0.3889 MVHYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEAFGLPLKSTWRTWYHHNQVGGRRSLLFIHSSLDTISLPHVRDHHAFFIFIFIIVKTLNLYACLFLNK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04810 113 Gene3D - 11 79 - -
Trre16g04810 113 Pfam Serine carboxypeptidase 4 67 IPR001563 GO:0004185|GO:0006508
Trre16g04810 113 SUPERFAMILY alpha/beta-Hydrolases 7 68 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04810 Trre-Chr16 52084273 52085957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04810 2 67 Calmodulin-binding Proteins AT2G22960 31.818 4.00e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04810 K16297 - gmx:100815141 135.576