Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04784 ATGGCTATGCAGTTAGTAATATTATTGTGTCTAGTAACTTCAGCATTTGCAGCCAAAGTGAATGAAGCCTATGGTGGTGACATTACTGGAAGTCCATTAGGGACTGGCACATATCAATACAGTTGCCCTGAAGCAGAGAATATAATCTTCTCTTGGGTGGAACAAGCTGTCTCTAGTGACCCAAGAATGGCAGCTTCATTGCTTAGGCTTCATTTTCATGATTGCTTTGGTTGCGATGCTTCAGTCTTGCTGGATGACACAACAAACTTTGTTGGTGAGAAAACTGCTGCTCCAAACGTGAATTCACTTAGAGGATTTGAAGTAATCAATGAAATAAAATCCGAACTAGAACTTGTTTGTCCACAAACTGTTTCTTGTGCTGATATACTGGCAACTGCTGCTCGAGATTCAGTTCATCTGTCAGGAGGACCAACTTGGGAGGTGCAAATGGGAAGAAAAGATAGTATAACAGCTAGCAAGGAAGGGGCAAATAATAATATTCCAGGCCCAAACTCAACCGTTGATATGCTTGTGGCCAAGTTTGAAAACGTTGGCCTTACACTTCAGGACATGGTTGCCCTCTCAGGTGCGCACACGATTGGAAAAGCCCGCTGCTCAACATTTAGATCTCGCTTACAAAGTAACGGCATTGCAGACGGTCCATATGTTAATGCTGAATTTGTTGCATCATTGCAACAGTTGTGCTCAGGACAAGATAATAGAAACCGAATTGCACATCTAGACCTAGCCACACCAGCAACATTCGATAACCAATACTATATTAATCTTCTCTCTGGGGAAGGATTGCTTCCATCAGACCAGACTCTGGTGAATGGGAATGATCAAACAAGACAGATTGTCGAAACCTATGTAGAGAACCCGTTTGCTTTCTTTCAAGACTTCAAGAATTCAATGATAAAAATGGGAAGCTTGGGATCAGTCACGCAGAGTAACGGACAGATTCGTAGGGACTGTCGAACTATTAACTAA 990 0.4232 MAMQLVILLCLVTSAFAAKVNEAYGGDITGSPLGTGTYQYSCPEAENIIFSWVEQAVSSDPRMAASLLRLHFHDCFGCDASVLLDDTTNFVGEKTAAPNVNSLRGFEVINEIKSELELVCPQTVSCADILATAARDSVHLSGGPTWEVQMGRKDSITASKEGANNNIPGPNSTVDMLVAKFENVGLTLQDMVALSGAHTIGKARCSTFRSRLQSNGIADGPYVNAEFVASLQQLCSGQDNRNRIAHLDLATPATFDNQYYINLLSGEGLLPSDQTLVNGNDQTRQIVETYVENPFAFFQDFKNSMIKMGSLGSVTQSNGQIRRDCRTIN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04784 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Trre16g04784 329 ProSiteProfiles Plant heme peroxidase family profile. 32 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Trre16g04784 329 Gene3D Peroxidase, domain 2 168 309 - -
Trre16g04784 329 FunFam Peroxidase 168 308 - -
Trre16g04784 329 Gene3D - 38 329 - -
Trre16g04784 329 PANTHER PEROXIDASE 72-RELATED 33 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 Pfam Peroxidase 53 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 FunFam Peroxidase 36 177 - -
Trre16g04784 329 CDD secretory_peroxidase 38 326 IPR033905 GO:0004601|GO:0042744
Trre16g04784 329 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 SUPERFAMILY Heme-dependent peroxidases 33 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04784 329 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04784 Trre-Chr16 51909149 51910636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04784 33 329 Peroxidase AT4G16270 64.120 5.51e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04784 K00430 - gmx:100787637 525.783