Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04783 ATGGCTATGCAGTTAGTAATATTATTGTGTCTAGTAACTTCAGCATTTGCAGCCAAAGTGAATGAAGCCTATGGTGGTGACATTACTGGAAGTCCATTAGGGACTGGCACATATCAATACAGTTGCCCTGAAGCAGAGAATATAATCTTCTCTTGGGTGGAACAAGCTGTCTCTAGTGACCCAAGAATGGCAGCTTCATTGCTTAGGCTTCATTTTCATGATTGCTTTGTCAATGGTTGCGATGCTTCAGTCTTGCTGGATGACACAACAAACTTTGTTGGTGAGAAAACTGCTGCTCCAAACGTGAATTCACTTAGAGGATTTGAAGTAATCAATGAAATAAAATCCGAACTAGAACTTGTTTGTCCACAAACTGTTTCTTGTGCTGATATACTGGCAACTGCTGCTCGAGATTCAGTTCATCTGTCAGGAGGACCAACTTGGGAGGTGCAAATGGGAAGAAAAGATAGTATAACAGCTAGCAAGGAAGGGGCAAATAATAATATTCCAGGCCCAAACTCAACCGTTGATATGCTTGTGGCCAAGTTTGAAAACGTTGGCCTTACACTTCAGGACATGGTTGCCCTCTCAGGTGCGCACACGATTGGAAAAGCCCGCTGCTCAACATTTAGATCTCGCTTACAAAGTAACGGCATTGCAGACGGTCCATATGTTAATGCTGAATTTGTTGCATCATTGCAACAGTTGTGCTCAGGACAAGATAATAGAAACCGAATTGCACATCTAGACCTAGCCACACCAGCAACATTCGATAACCAATACTATATTAATCTTCTCTCTGGGGAAGGATTGCTTCCATCAGACCAGACTCTGGTGAATGGGAATGATCAAACAAGACAGATTGTCGAAACCTATGTAGAGAACCCGTTTGCTTTCTTTCAAGACTTCAAGAATTCAATGATAAAAATGGGAAGCTTGGGATCAGTCACGCAGAGTAACGGACAGATTCGTAGGGACTGTCGAACTATTAACTAA 996 0.4227 MAMQLVILLCLVTSAFAAKVNEAYGGDITGSPLGTGTYQYSCPEAENIIFSWVEQAVSSDPRMAASLLRLHFHDCFVNGCDASVLLDDTTNFVGEKTAAPNVNSLRGFEVINEIKSELELVCPQTVSCADILATAARDSVHLSGGPTWEVQMGRKDSITASKEGANNNIPGPNSTVDMLVAKFENVGLTLQDMVALSGAHTIGKARCSTFRSRLQSNGIADGPYVNAEFVASLQQLCSGQDNRNRIAHLDLATPATFDNQYYINLLSGEGLLPSDQTLVNGNDQTRQIVETYVENPFAFFQDFKNSMIKMGSLGSVTQSNGQIRRDCRTIN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04783 331 SUPERFAMILY Heme-dependent peroxidases 33 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Trre16g04783 331 ProSiteProfiles Plant heme peroxidase family profile. 32 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PANTHER PEROXIDASE 72-RELATED 33 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 Gene3D Peroxidase, domain 2 170 311 - -
Trre16g04783 331 Gene3D - 38 331 - -
Trre16g04783 331 Pfam Peroxidase 53 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04783 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Trre16g04783 331 FunFam Peroxidase 170 310 - -
Trre16g04783 331 CDD secretory_peroxidase 38 328 IPR033905 GO:0004601|GO:0042744
Trre16g04783 331 FunFam Peroxidase 36 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04783 Trre-Chr16 51909149 51910636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04783 33 331 Peroxidase AT4G16270 64.784 1.98e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04783 K00430 - gmx:100787637 534.643