Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04676 ATGGCGGATTCATTAGGGCAAAATTGGAAGAATCGAGACTTTACTCTTGCTTCGGTTTCCGACCTCTCTTCCGATGCTTCATCGCCGGGAATTGCTCGCTTCACCTCCGATGCTCTTCAAATTCATCCCGAATCTCCACAGATTCCTCTCAATTTCGATCTCCGAACTGCTCAGATATTGAAATTGAGTCCTGTTCAATCGCTTTGTGTTACGGAAGGTTCTGATGACGGTAAATCGGGATCTTATTCTACGGGAGTCAGTATCCAGTTTAAAAACGAGGAGGATTGTGCGGCCTTTCATTCTGCAATCCAACAATGGATAAAGGAAAACAATGTTCAAGGAAACTTGCCAAATGGAACTTTAACAACATCTAAAAGCAAATTTGATGAAAAGATAGAACCATCTTCTGCAAAAATGTATTTTCACTATTATGGACAACTTCTTCATCAGCAAAACATGTTGCAGGACTATGTGCGGACAGGAACTTATTATGCTGCGGTTATTGAGAACCGTGCCGATTTTACCGGTCGTGTAGTAGTTGATGTGGGTGCTGGTAGCGGTATTTTGTCATTGTTTGCTGCTCAGGCCGGTGCTAAACATGTTTATGCTGTTGAAGCCTCTGAAATGGCAGAATATGCACGTAAACTCATAGCTGGGAACCCAAAATTGGCTCAACGAATTACAGTGATTAAAGGGAGAGTTGAGGATGTTGAGTTGCCTGAGAAAGCAGACATTCTGATCTCGGAGCCCATGGGCACTTTGTTAGTTAATGAGAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACTCCTACTGGGAAAATGTTTCCTGGGGTGGGAAGGATTCACATGGCACCTTTCACAGATGAATATTTATTTATTGAAATTGCTAATAAGGCCCTATTCTGGCAGCAACAAAATTATTATGGTGTGGATTTGACACCCTTACACGGGACTGCATTTCAAGGATATTTTTCTCAGCCTGTGGTAGATGCTTTTGACCCAAGATTGTTGATAGCTCCCCCAATGTTCCATGTATTAGACTTCGGCAAAATGAAGGAAGAAGAATTATATGAAATTGACATTCCTCTGAAATTCACTGCCTCTGTGGGCACCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCCACAACCCATTGGTACCAGCTACGCTGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGGCAAGAAATTACCGGCAGGCTTCATTTGATTGCACACAATGCACAGAGTTATACAATATATTTAACATTGTCTGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCTTGTAAGCTTGATCTCAAAGAACCCTACTATAGAATGTCCCAACCACAAGCTTATCCGTTAGCCCAAGATCAGCAACCTCAACCACTTGTACAAACACAGGATATACATATCCAATCTCAGGAATTGGAAGAACCAGAAATAATGCAACAGCTTTCGCCTAATTCTTGTGCTCAGATTGATTCGCTGATGCAGAAGATTTAA 1599 0.4246 MADSLGQNWKNRDFTLASVSDLSSDASSPGIARFTSDALQIHPESPQIPLNFDLRTAQILKLSPVQSLCVTEGSDDGKSGSYSTGVSIQFKNEEDCAAFHSAIQQWIKENNVQGNLPNGTLTTSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPKLAQRITVIKGRVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVLDFGKMKEEELYEIDIPLKFTASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLAQDQQPQPLVQTQDIHIQSQELEEPEIMQQLSPNSCAQIDSLMQKI 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04676 532 Pfam Ribosomal protein L11 methyltransferase (PrmA) 175 249 - -
Trre16g04676 532 Gene3D Vaccinia Virus protein VP39 119 280 IPR029063 -
Trre16g04676 532 CDD AdoMet_MTases 179 279 - -
Trre16g04676 532 FunFam Probable histone-arginine methyltransferase CARM1 282 490 - -
Trre16g04676 532 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 92 463 IPR025799 GO:0016274|GO:0018216
Trre16g04676 532 FunFam Probable histone-arginine methyltransferase CARM1 120 280 - -
Trre16g04676 532 Gene3D - 282 490 - -
Trre16g04676 532 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 143 454 IPR029063 -
Trre16g04676 532 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 133 448 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04676 Trre-Chr16 51137931 51143713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04676 140 429 C2H2 Transcription Factor Family AT3G12270 34.416 2.84e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04676 K05931 - gmx:100780736 912.524