Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04675 ATGGCGGATTCATTAGGGCAAAATTGGAAGAATCGAGACTTTACTCTTGCTTCGGTTTCCGACCTCTCTTCCGATGCTTCATCGCCGGGAATTGCTCGCTTCACCTCCGATGCTCTTCAAATTCATCCCGAATCTCCACAGATTCCTCTCAATTTCGATCTCCGAACTGCTCAGATATTGAAATTGAGTCCTGTTCAATCGCTTTGTGTTACGGAAGGTTCTGATGACGGTAAATCGGGATCTTATTCTACGGGAGTCAGTATCCAGTTTAAAAACGAGGAGGATTGTGCGGCCTTTCATTCTGCAATCCAACAATGGATAAAGGAAAACAATGTTCAAGCAGGAAACTTGCCAAATGGAACTTTAACAACATCTAAAAGCAAATTTGATGAAAAGATAGAACCATCTTCTGCAAAAATGTATTTTCACTATTATGGACAACTTCTTCATCAGCAAAACATGTTGCAGGACTATGTGCGGACAGGAACTTATTATGCTGCGGTTATTGAGAACCGTGCCGATTTTACCGGTCGTGTAGTAGTTGATGTGGGTGCTGGTAGCGGTATTTTGTCATTGTTTGCTGCTCAGGCCGGTGCTAAACATGTTTATGCTGTTGAAGCCTCTGAAATGGCAGAATATGCACGTAAACTCATAGCTGGGAACCCAAAATTGGCTCAACGAATTACAGTGATTAAAGGGAGAGTTGAGGATGTTGAGTTGCCTGAGAAAGCAGACATTCTGATCTCGGAGCCCATGGGCACTTTGTTAGTTAATGAGAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACTCCTACTGGGAAAATGTTTCCTGGGGTGGGAAGGATTCACATGGCACCTTTCACAGATGAATATTTATTTATTGAAATTGCTAATAAGGCCCTATTCTGGCAGCAACAAAATTATTATGGTGTGGATTTGACACCCTTACACGGGACTGCATTTCAAGGATATTTTTCTCAGCCTGTGGTAGATGCTTTTGACCCAAGATTGTTGATAGCTCCCCCAATGTTCCATGTATTAGACTTCGGCAAAATGAAGGAAGAAGAATTATATGAAATTGACATTCCTCTGAAATTCACTGCCTCTGTGGGCACCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCCACAACCCATTGGTACCAGCTACGCTGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGGCAAGAAATTACCGGCAGGCTTCATTTGATTGCACACAATGCACAGAGTTATACAATATATTTAACATTGTCTGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCTTGTAAGCTTGATCTCAAAGAACCCTACTATAGAATGTCCCAACCACAAGCTTATCCGTTAGCCCAAGATCAGCAACCTCAACCACTTGTACAAACACAGGATATACATATCCAATCTCAGGAATTGGAAGAACCAGAAATAATGCAACAGCTTTCGCCTAATTCTTGTGCTCAGATTGATTCGCTGATGCAGAAGATTTAA 1602 0.4251 MADSLGQNWKNRDFTLASVSDLSSDASSPGIARFTSDALQIHPESPQIPLNFDLRTAQILKLSPVQSLCVTEGSDDGKSGSYSTGVSIQFKNEEDCAAFHSAIQQWIKENNVQAGNLPNGTLTTSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPKLAQRITVIKGRVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVLDFGKMKEEELYEIDIPLKFTASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLAQDQQPQPLVQTQDIHIQSQELEEPEIMQQLSPNSCAQIDSLMQKI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04675 533 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 134 449 IPR025799 GO:0016274|GO:0018216
Trre16g04675 533 Gene3D - 283 491 - -
Trre16g04675 533 Gene3D Vaccinia Virus protein VP39 120 281 IPR029063 -
Trre16g04675 533 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 92 464 IPR025799 GO:0016274|GO:0018216
Trre16g04675 533 Pfam Ribosomal protein L11 methyltransferase (PrmA) 176 250 - -
Trre16g04675 533 FunFam Probable histone-arginine methyltransferase CARM1 121 281 - -
Trre16g04675 533 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 455 IPR029063 -
Trre16g04675 533 CDD AdoMet_MTases 180 280 - -
Trre16g04675 533 FunFam Probable histone-arginine methyltransferase CARM1 283 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04675 Trre-Chr16 51137931 51143713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04675 141 430 C2H2 Transcription Factor Family AT3G12270 34.416 3.15e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04675 K05931 - gmx:100780736 916.761