Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04650 ATGTTTCACCTTCACCGTCTCAGAGCTCTCCTCCACCTCAAAAACAATCTTCCCCAAACCTCAAAATGCCACTTTCTTCTTCTTCTTCAACCCCACTTTCTCAACCCATTCTCCACCACAACTTCAAATTCAGATCAACAATCTTTCACCATATCATACCTCACCAACACCTGTGGCTTATCTCCACAAGATGCTCTCAAACTATCCAAACGACTTCGTTTCAAAACCCCCCCAAAAACCCGATTCCTTTATCACCTTCTTCAAAAACCACGATGTCCTCGTTTTCTTCGTGTAAGTCTCGACAAACACATTATCCCTGCTTTTGATTTGGTACGAAGTTTCTGTCCCTCTAATCAAAAAGCTATTGATTCTATTATTGCTTGTCCAACTTCAATTAGTGATGGTAGAATGAAACCAAATATGAAATTTTTGATTGATTTTGGTGTCACTGGTTCAAATATTTATCATTTACTTAGGACTAGACCTTCTATAATATGTTCTACTGATTTGAAAAATGTTGTTGAGGAGATTAAGGAATTAGGGTTTGACCCTTCAAAAGGTTCTTTTAGTGTAGCTTTATTGGCCAAAAGGGCTACCACTAAATCACAATGGGATGCTAAAGTTGATGTCTTGAAGAGTTGGGGCTGTTCTGAAGATGAAATTTTATGCTACGAGAAAAGGCTTAGTCCAAGGGGTTCAATTGTCAAGTATCTTCTATCCAAAGGTTTGTTAAAGGAGAGAGCTTCTTTATGTACACCATTTAACTTGAGTGACGAGGATTTCCAGCGAAGGTATGTGAAACGTTTTGCGGTGGATACATCTAGGCTATTGGGAGAATGCTAG 843 0.3891 MFHLHRLRALLHLKNNLPQTSKCHFLLLLQPHFLNPFSTTTSNSDQQSFTISYLTNTCGLSPQDALKLSKRLRFKTPPKTRFLYHLLQKPRCPRFLRVSLDKHIIPAFDLVRSFCPSNQKAIDSIIACPTSISDGRMKPNMKFLIDFGVTGSNIYHLLRTRPSIICSTDLKNVVEEIKELGFDPSKGSFSVALLAKRATTKSQWDAKVDVLKSWGCSEDEILCYEKRLSPRGSIVKYLLSKGLLKERASLCTPFNLSDEDFQRRYVKRFAVDTSRLLGEC 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04650 280 PANTHER CGI-12 PROTEIN-RELATED 91 222 IPR003690 GO:0003690|GO:0006355
Trre16g04650 280 Gene3D Transcription termination factor 3, mitochondrial 87 272 IPR038538 -
Trre16g04650 280 Pfam mTERF 91 221 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04650 Trre-Chr16 50963060 50964151 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre16g04650 mTERF 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04650 K15032 - gmx:102667698 171.4