Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04566 ATGGCCGATCCTTCGGCTCAATTGAATCAACATAATGATGTACCCGGCTCAATACTTAATGAAGCGGTTGTCGCACCCGTCGTACCACAAGCTATAGTTGTTGCACCTGACATTCCCCAAGGTAATGTTGCTGAACCGGGTATTGATGAAGCAGAGGATGCACACGGCATTTCCGTTGACACCGGAAGGTATTTTTATAATGCCCCAAATTTTAAGGTCCGAGATGAGTTGATTGATTGGTGTAGAAGGGAGGCTTTAAAGGCTGGTTTTTCCATGGTGATCGAAAAATCTGATAATGGTAACCATAATAGGAAGCCGTATTTCATTTTGGGTTGCGAAAGAGGCGGTGTCTACAAAGAACCGAAAAGGAAATTGAAGAGAGATGACACGGCAACAAGGAAATGTCAGTGCCCGTTCAGGTTACGAGGATACTTTTTGTCGTCTCAGGAATGGAAGTTAAGTGTCGTGACTGGTGAGCATAACCATGAGATGGAGAAAAATTTGGAAGGTCACATTCTTGCCGGACGTTTAAAACCGGAGGAAAAGGAGTGTGTCCACCAGTTGACAAGGAACTTGGTGGCTCCGAAAATCATTTTGAACACGTTGAAGGAGAAGAATAAAGATCTTAAGACAAATATGAAGCAAATCTACAACGAGCGTCAACGATACAAACGTGATCTTAGGGGTGAAATGACTGAAATTCAACAACTCTTGAAGTGTCTTGAAGCTCACAAATACTTCCACAAGTTTAGAACCAATGGTGAGTCGACAAGTTTACAGGACATTTTCTGGGCACATCCTGATAGTGTTAAGTTGTTTAACACCTTTCCGACCGTACTCTTGATGGATTCGACTTACAAGACCAACAAGTATAAAATGCCTCTGTTTGAGATAGTTGGTGTAACCTCGACACAAGAGACTTTCAATGTTGCCTATGCATTTCTCACAAATGAAAGAGAAGACAATTTTAAATGGGCCCTCAAGGCGTGTCAGAGTCTTCTTAAGGATAACGAGGGTATGCCGAAAGTGATTATCACCGATAGGGACAAGTCACTGATGAATGCGGTTGAGACTGTTTTTCCAAATTCAACTGCAATGGTGTGTCGGTATCACGTTTATAAAAACGTAAGGGCGAAGTTCAAAGATTTATGTAGAGCAAAGGATCAGAAAATGGATGACTTACTGGAAACTCTCAGATTACAATGGGAATCAGTTGTGGAGTCGACTTCAGAAGAGGCATACAGTCATGCAGTTGTCGAGTTTAGGAGAGTGTTTGCTAAATTTCCAAGGTTTTTGCAATATGTTGATGAGACAGTTTTAGATCCGGTGAAGGAGAAAATTGTTAGTGCATGGACAAACCAAGTTATGCACATGGGCAACACTACAACCAATAGGGTTGAGTCTCAGCATGGTTCGCTAAAAGAAACTATCAAAGATTGCAAGGGTGATTTAGTATACTGTTGGGATGCAATACATCAGATGCTTGGAAATCAATTTACAAAGATCAAGACGTCATTCGGACAGAGTACTACAGCTGTAGAACACCATTTTAAAGATCATTTTTTGTACTCGAGGTTGATCTATAATGTCTCGAGGGAGGGGTTAAAATTCATCTGTGGCGAAGAGGCGAGGTCAAGGGAAACCGGTAGAAATCGAAAGAAGCTTGATGAGGTCAACACCCATTGGAAAAGGCTGCAATATGAAGAAGGCGGTGCAGTCGAAGTTTCTTGCTTGGATGAGTTGAATGCAATTCAGGAACGGTTTAAATTAGCAAACCATGACATGAAGTTGCAAATCAAAGAGGAATTGCGGTTGATAGCATATCCAGAAACAACATCGATTGAAAATGAAAAAGCACTTATCCCGAAGGCAAAGTCAAATAAAGATGATCCCGTCTATATTGGTTGA 1908 0.4146 MADPSAQLNQHNDVPGSILNEAVVAPVVPQAIVVAPDIPQGNVAEPGIDEAEDAHGISVDTGRYFYNAPNFKVRDELIDWCRREALKAGFSMVIEKSDNGNHNRKPYFILGCERGGVYKEPKRKLKRDDTATRKCQCPFRLRGYFLSSQEWKLSVVTGEHNHEMEKNLEGHILAGRLKPEEKECVHQLTRNLVAPKIILNTLKEKNKDLKTNMKQIYNERQRYKRDLRGEMTEIQQLLKCLEAHKYFHKFRTNGESTSLQDIFWAHPDSVKLFNTFPTVLLMDSTYKTNKYKMPLFEIVGVTSTQETFNVAYAFLTNEREDNFKWALKACQSLLKDNEGMPKVIITDRDKSLMNAVETVFPNSTAMVCRYHVYKNVRAKFKDLCRAKDQKMDDLLETLRLQWESVVESTSEEAYSHAVVEFRRVFAKFPRFLQYVDETVLDPVKEKIVSAWTNQVMHMGNTTTNRVESQHGSLKETIKDCKGDLVYCWDAIHQMLGNQFTKIKTSFGQSTTAVEHHFKDHFLYSRLIYNVSREGLKFICGEEARSRETGRNRKKLDEVNTHWKRLQYEEGGAVEVSCLDELNAIQERFKLANHDMKLQIKEELRLIAYPETTSIENEKALIPKAKSNKDDPVYIG 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04566 635 Pfam MULE transposase domain 279 375 IPR018289 -
Trre16g04566 635 Pfam Transcription factor AFT 122 164 IPR014842 GO:0000981|GO:0036086
Trre16g04566 635 Coils Coil 199 244 - -
Trre16g04566 635 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 512 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04566 Trre-Chr16 50254943 50257807 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre16g04566 MULE 1.6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04566 - - tpra:123922247 777.704