Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04542 ATGTCATTTTCTCTACTTAAGTTTGAAGAGTTCTATATCAGTAAGAAATACTACTATAGGGGGACTCAACATAACTGTAAAACATGGCAGAGCTGGTGGTACAATGCTACCTGCACTGCACTTGTGGATAAGTTGATTGAGTTGGATGTGGAAATTGGATGGGATGCCAAATGCATATTTGAAATGGATATAGAAGACATTGTGGAATTTGCAGATGATGATGAGAAATATTATAGACAAGAACCAAACAAGACAGTGATTGAAACAAACATGGAGAAGTTGAATATTGTGCTTGATGTGTATGAGGCAAAACGAAGCACAACGAAGTACCTTGCTGGAGATTTTTATAGTCTTGCTGATCTTAGTCATATATCTGAAGCTCACTATTTTATGCAAACCCCTTGTGCTTCAATGATCAATGAAAGGATTCATGTTAAGGCGTGGTGGGAAGATATATCTTCTAGGCCCGCTTTTCAAAAAGTTGTGGGTGGTATGAGTTTTGGTCAGAATGACCAAAGTGATTATTTTGTTAGGCTTAATTGCATTATCTAG 552 0.3714 MSFSLLKFEEFYISKKYYYRGTQHNCKTWQSWWYNATCTALVDKLIELDVEIGWDAKCIFEMDIEDIVEFADDDEKYYRQEPNKTVIETNMEKLNIVLDVYEAKRSTTKYLAGDFYSLADLSHISEAHYFMQTPCASMINERIHVKAWWEDISSRPAFQKVVGGMSFGQNDQSDYFVRLNCII 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04542 183 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 35 177 IPR010987 -
Trre16g04542 183 SUPERFAMILY GST C-terminal domain-like 77 165 IPR036282 -
Trre16g04542 183 FunFam Glutathione S-transferase F2 57 162 - -
Trre16g04542 183 PANTHER GLUTATHIONE S-TRANSFERASE RHO 80 162 - -
Trre16g04542 183 Gene3D - 73 162 - -
Trre16g04542 183 Pfam Glutathione S-transferase, C-terminal domain 77 156 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04542 Trre-Chr16 50061210 50064090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04542 80 169 Glutathione S-transferase Gene Family AT3G62760 52.222 2.27e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04542 K00799 - gmx:547588 161.384